Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP1S1P61966 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.42■□□□□ 0.54
AP1S1P61966 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
AP1S1P61966 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.42■□□□□ 0.54
AP1S1P61966 IER3-202ENST00000376377 1350 ntBASIC18.42■□□□□ 0.54
AP1S1P61966 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP1S1P61966 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
AP1S1P61966 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP1S1P61966 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP1S1P61966 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP1S1P61966 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.41■□□□□ 0.54
AP1S1P61966 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP1S1P61966 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
AP1S1P61966 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.41■□□□□ 0.54
AP1S1P61966 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP1S1P61966 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.41■□□□□ 0.54
AP1S1P61966 AC011498.5-201ENST00000592027 486 ntBASIC18.41■□□□□ 0.54
AP1S1P61966 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
AP1S1P61966 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.41■□□□□ 0.54
AP1S1P61966 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
AP1S1P61966 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP1S1P61966 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.41■□□□□ 0.54
AP1S1P61966 RNF165-205ENST00000588679 2904 ntBASIC18.41■□□□□ 0.54
AP1S1P61966 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP1S1P61966 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP1S1P61966 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.41■□□□□ 0.54
AP1S1P61966 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP1S1P61966 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
AP1S1P61966 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP1S1P61966 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP1S1P61966 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
AP1S1P61966 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
AP1S1P61966 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP1S1P61966 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.4■□□□□ 0.54
AP1S1P61966 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AP1S1P61966 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP1S1P61966 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AP1S1P61966 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.4■□□□□ 0.54
AP1S1P61966 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.4■□□□□ 0.54
AP1S1P61966 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.4■□□□□ 0.54
AP1S1P61966 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AP1S1P61966 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.4■□□□□ 0.54
AP1S1P61966 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.4■□□□□ 0.54
AP1S1P61966 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.4■□□□□ 0.54
AP1S1P61966 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.4■□□□□ 0.54
AP1S1P61966 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.4■□□□□ 0.54
AP1S1P61966 GPR32P1-201ENST00000601788 811 ntBASIC18.4■□□□□ 0.54
AP1S1P61966 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.4■□□□□ 0.54
AP1S1P61966 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP1S1P61966 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP1S1P61966 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP1S1P61966 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
AP1S1P61966 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.4■□□□□ 0.54
AP1S1P61966 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
AP1S1P61966 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
AP1S1P61966 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.4■□□□□ 0.54
AP1S1P61966 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP1S1P61966 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.4■□□□□ 0.54
AP1S1P61966 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
AP1S1P61966 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
AP1S1P61966 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP1S1P61966 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
AP1S1P61966 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
AP1S1P61966 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.39■□□□□ 0.54
AP1S1P61966 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
AP1S1P61966 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S1P61966 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S1P61966 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S1P61966 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
AP1S1P61966 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.39■□□□□ 0.53
AP1S1P61966 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S1P61966 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S1P61966 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
AP1S1P61966 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.39■□□□□ 0.53
AP1S1P61966 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
AP1S1P61966 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.39■□□□□ 0.53
AP1S1P61966 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S1P61966 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.39■□□□□ 0.53
AP1S1P61966 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S1P61966 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
AP1S1P61966 RNF126P1-202ENST00000569893 925 ntBASIC18.39■□□□□ 0.53
AP1S1P61966 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.39■□□□□ 0.53
AP1S1P61966 AC005332.3-201ENST00000589904 676 ntBASIC18.39■□□□□ 0.53
AP1S1P61966 AL390719.2-201ENST00000606993 987 ntBASIC18.39■□□□□ 0.53
AP1S1P61966 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.39■□□□□ 0.53
AP1S1P61966 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.39■□□□□ 0.53
AP1S1P61966 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S1P61966 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
AP1S1P61966 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.39■□□□□ 0.53
AP1S1P61966 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.39■□□□□ 0.53
AP1S1P61966 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S1P61966 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
AP1S1P61966 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.39■□□□□ 0.53
AP1S1P61966 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.39■□□□□ 0.53
AP1S1P61966 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S1P61966 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S1P61966 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S1P61966 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP1S1P61966 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
AP1S1P61966 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms