Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CXCR4P61073 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CXCR4P61073 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CXCR4P61073 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CXCR4P61073 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CXCR4P61073 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CXCR4P61073 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CXCR4P61073 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CXCR4P61073 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CXCR4P61073 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.71■□□□□ 0.27
CXCR4P61073 POU5F1P3-201ENST00000428824 1078 ntBASIC16.71■□□□□ 0.27
CXCR4P61073 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.71■□□□□ 0.27
CXCR4P61073 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CXCR4P61073 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CXCR4P61073 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.71■□□□□ 0.27
CXCR4P61073 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.71■□□□□ 0.27
CXCR4P61073 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CXCR4P61073 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CXCR4P61073 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CXCR4P61073 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CXCR4P61073 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.71■□□□□ 0.27
CXCR4P61073 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CXCR4P61073 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CXCR4P61073 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CXCR4P61073 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.71■□□□□ 0.27
CXCR4P61073 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CXCR4P61073 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CXCR4P61073 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CXCR4P61073 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CXCR4P61073 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CXCR4P61073 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CXCR4P61073 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CXCR4P61073 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CXCR4P61073 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.71■□□□□ 0.26
CXCR4P61073 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CXCR4P61073 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.7■□□□□ 0.26
CXCR4P61073 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CXCR4P61073 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CXCR4P61073 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CXCR4P61073 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
CXCR4P61073 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CXCR4P61073 PHGDH-209ENST00000641074 1780 ntBASIC16.7■□□□□ 0.26
CXCR4P61073 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CXCR4P61073 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CXCR4P61073 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CXCR4P61073 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CXCR4P61073 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.7■□□□□ 0.26
CXCR4P61073 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CXCR4P61073 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CXCR4P61073 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CXCR4P61073 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.7■□□□□ 0.26
CXCR4P61073 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CXCR4P61073 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CXCR4P61073 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.7■□□□□ 0.26
CXCR4P61073 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CXCR4P61073 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CXCR4P61073 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CXCR4P61073 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CXCR4P61073 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CXCR4P61073 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CXCR4P61073 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CXCR4P61073 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.69■□□□□ 0.26
CXCR4P61073 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.69■□□□□ 0.26
CXCR4P61073 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CXCR4P61073 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.69■□□□□ 0.26
CXCR4P61073 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CXCR4P61073 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CXCR4P61073 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CXCR4P61073 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CXCR4P61073 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CXCR4P61073 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CXCR4P61073 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CXCR4P61073 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.69■□□□□ 0.26
CXCR4P61073 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CXCR4P61073 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CXCR4P61073 MIR935-201ENST00000401179 91 ntBASIC16.69■□□□□ 0.26
CXCR4P61073 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.69■□□□□ 0.26
CXCR4P61073 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.69■□□□□ 0.26
CXCR4P61073 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.69■□□□□ 0.26
CXCR4P61073 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CXCR4P61073 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.69■□□□□ 0.26
CXCR4P61073 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.69■□□□□ 0.26
CXCR4P61073 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CXCR4P61073 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CXCR4P61073 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CXCR4P61073 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.69■□□□□ 0.26
CXCR4P61073 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.69■□□□□ 0.26
CXCR4P61073 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
CXCR4P61073 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CXCR4P61073 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CXCR4P61073 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CXCR4P61073 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CXCR4P61073 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.69■□□□□ 0.26
CXCR4P61073 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CXCR4P61073 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.69■□□□□ 0.26
CXCR4P61073 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CXCR4P61073 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.69■□□□□ 0.26
CXCR4P61073 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CXCR4P61073 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CXCR4P61073 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms