Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.24■□□□□ 0.67
ERVFC1P60507 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.24■□□□□ 0.67
ERVFC1P60507 AC083906.6-201ENST00000641366 219 ntBASIC19.24■□□□□ 0.67
ERVFC1P60507 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERVFC1P60507 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERVFC1P60507 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERVFC1P60507 LINC00602-201ENST00000629776 2065 ntBASIC19.24■□□□□ 0.67
ERVFC1P60507 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ERVFC1P60507 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERVFC1P60507 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERVFC1P60507 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERVFC1P60507 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERVFC1P60507 AFG3L1P-217ENST00000557444 2447 ntBASIC19.23■□□□□ 0.67
ERVFC1P60507 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERVFC1P60507 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERVFC1P60507 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
ERVFC1P60507 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.23■□□□□ 0.67
ERVFC1P60507 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERVFC1P60507 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERVFC1P60507 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ERVFC1P60507 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERVFC1P60507 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.23■□□□□ 0.67
ERVFC1P60507 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.23■□□□□ 0.67
ERVFC1P60507 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.23■□□□□ 0.67
ERVFC1P60507 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.23■□□□□ 0.67
ERVFC1P60507 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.23■□□□□ 0.67
ERVFC1P60507 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.23■□□□□ 0.67
ERVFC1P60507 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.23■□□□□ 0.67
ERVFC1P60507 AC012640.2-201ENST00000561606 901 ntBASIC19.23■□□□□ 0.67
ERVFC1P60507 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.23■□□□□ 0.67
ERVFC1P60507 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.23■□□□□ 0.67
ERVFC1P60507 AC055717.3-201ENST00000622967 595 ntBASIC19.23■□□□□ 0.67
ERVFC1P60507 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.23■□□□□ 0.67
ERVFC1P60507 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERVFC1P60507 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
ERVFC1P60507 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERVFC1P60507 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERVFC1P60507 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.23■□□□□ 0.67
ERVFC1P60507 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERVFC1P60507 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERVFC1P60507 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ERVFC1P60507 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ERVFC1P60507 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ERVFC1P60507 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERVFC1P60507 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ERVFC1P60507 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ERVFC1P60507 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ERVFC1P60507 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERVFC1P60507 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ERVFC1P60507 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ERVFC1P60507 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ERVFC1P60507 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.22■□□□□ 0.67
ERVFC1P60507 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERVFC1P60507 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERVFC1P60507 FAM220CP-201ENST00000395253 831 ntBASIC19.22■□□□□ 0.67
ERVFC1P60507 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.22■□□□□ 0.67
ERVFC1P60507 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.22■□□□□ 0.67
ERVFC1P60507 AC140113.2-201ENST00000604370 208 ntBASIC19.22■□□□□ 0.67
ERVFC1P60507 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.22■□□□□ 0.67
ERVFC1P60507 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERVFC1P60507 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERVFC1P60507 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.22■□□□□ 0.67
ERVFC1P60507 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.22■□□□□ 0.67
ERVFC1P60507 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERVFC1P60507 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.21■□□□□ 0.67
ERVFC1P60507 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERVFC1P60507 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERVFC1P60507 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERVFC1P60507 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERVFC1P60507 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERVFC1P60507 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.21■□□□□ 0.67
ERVFC1P60507 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.21■□□□□ 0.67
ERVFC1P60507 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ERVFC1P60507 AC092910.1-201ENST00000482027 1129 ntBASIC19.21■□□□□ 0.67
ERVFC1P60507 AC034105.1-201ENST00000563488 319 ntBASIC19.21■□□□□ 0.67
ERVFC1P60507 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ERVFC1P60507 AL356488.2-201ENST00000602755 427 ntBASIC19.21■□□□□ 0.67
ERVFC1P60507 AC027601.4-201ENST00000611259 610 ntBASIC19.21■□□□□ 0.67
ERVFC1P60507 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
ERVFC1P60507 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ERVFC1P60507 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ERVFC1P60507 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.21■□□□□ 0.67
ERVFC1P60507 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERVFC1P60507 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERVFC1P60507 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ERVFC1P60507 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ERVFC1P60507 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
ERVFC1P60507 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERVFC1P60507 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERVFC1P60507 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERVFC1P60507 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ERVFC1P60507 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.2■□□□□ 0.66
ERVFC1P60507 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERVFC1P60507 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERVFC1P60507 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERVFC1P60507 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERVFC1P60507 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ERVFC1P60507 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.2■□□□□ 0.66
ERVFC1P60507 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.2■□□□□ 0.66
ERVFC1P60507 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms