Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MCCD1P59942 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.61■□□□□ 0.73
MCCD1P59942 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
MCCD1P59942 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MCCD1P59942 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.61■□□□□ 0.73
MCCD1P59942 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
MCCD1P59942 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MCCD1P59942 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MCCD1P59942 KRT18P65-201ENST00000439811 1286 ntBASIC19.61■□□□□ 0.73
MCCD1P59942 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.61■□□□□ 0.73
MCCD1P59942 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.61■□□□□ 0.73
MCCD1P59942 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MCCD1P59942 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.61■□□□□ 0.73
MCCD1P59942 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.61■□□□□ 0.73
MCCD1P59942 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.61■□□□□ 0.73
MCCD1P59942 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.61■□□□□ 0.73
MCCD1P59942 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MCCD1P59942 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.61■□□□□ 0.73
MCCD1P59942 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MCCD1P59942 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
MCCD1P59942 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MCCD1P59942 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MCCD1P59942 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MCCD1P59942 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MCCD1P59942 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MCCD1P59942 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MCCD1P59942 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MCCD1P59942 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.61■□□□□ 0.73
MCCD1P59942 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.6■□□□□ 0.73
MCCD1P59942 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MCCD1P59942 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
MCCD1P59942 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
MCCD1P59942 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MCCD1P59942 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.6■□□□□ 0.73
MCCD1P59942 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MCCD1P59942 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.6■□□□□ 0.73
MCCD1P59942 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MCCD1P59942 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MCCD1P59942 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.6■□□□□ 0.73
MCCD1P59942 KRT18P48-201ENST00000434763 852 ntBASIC19.6■□□□□ 0.73
MCCD1P59942 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
MCCD1P59942 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MCCD1P59942 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MCCD1P59942 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MCCD1P59942 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MCCD1P59942 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
MCCD1P59942 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.6■□□□□ 0.73
MCCD1P59942 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MCCD1P59942 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MCCD1P59942 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MCCD1P59942 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MCCD1P59942 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.6■□□□□ 0.73
MCCD1P59942 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
MCCD1P59942 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MCCD1P59942 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
MCCD1P59942 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
MCCD1P59942 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MCCD1P59942 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.59■□□□□ 0.73
MCCD1P59942 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MCCD1P59942 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MCCD1P59942 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MCCD1P59942 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MCCD1P59942 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MCCD1P59942 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MCCD1P59942 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MCCD1P59942 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MCCD1P59942 AC006116.8-202ENST00000587620 1550 ntBASIC19.59■□□□□ 0.73
MCCD1P59942 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MCCD1P59942 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MCCD1P59942 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MCCD1P59942 AL359075.1-203ENST00000462729 1002 ntBASIC19.59■□□□□ 0.73
MCCD1P59942 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.59■□□□□ 0.73
MCCD1P59942 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
MCCD1P59942 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.59■□□□□ 0.73
MCCD1P59942 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MCCD1P59942 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.59■□□□□ 0.73
MCCD1P59942 AL136038.3-201ENST00000561909 1096 ntBASIC19.59■□□□□ 0.73
MCCD1P59942 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.59■□□□□ 0.73
MCCD1P59942 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MCCD1P59942 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.59■□□□□ 0.73
MCCD1P59942 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
MCCD1P59942 RNF165-205ENST00000588679 2904 ntBASIC19.59■□□□□ 0.73
MCCD1P59942 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MCCD1P59942 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
MCCD1P59942 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
MCCD1P59942 LINC01311-201ENST00000565162 1445 ntBASIC19.59■□□□□ 0.73
MCCD1P59942 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MCCD1P59942 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MCCD1P59942 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
MCCD1P59942 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MCCD1P59942 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MCCD1P59942 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MCCD1P59942 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
MCCD1P59942 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MCCD1P59942 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.58■□□□□ 0.72
MCCD1P59942 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MCCD1P59942 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MCCD1P59942 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.58■□□□□ 0.72
MCCD1P59942 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.58■□□□□ 0.72
MCCD1P59942 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms