Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
FAM3BP58499 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3BP58499 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
FAM3BP58499 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3BP58499 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3BP58499 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3BP58499 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
FAM3BP58499 BX276092.2-201ENST00000417668 665 ntBASIC14.29□□□□□ -0.12
FAM3BP58499 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.29□□□□□ -0.12
FAM3BP58499 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3BP58499 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
FAM3BP58499 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.29□□□□□ -0.12
FAM3BP58499 PHB2-213ENST00000546111 858 ntTSL 2 BASIC14.29□□□□□ -0.12
FAM3BP58499 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3BP58499 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3BP58499 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3BP58499 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3BP58499 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.29□□□□□ -0.12
FAM3BP58499 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.29□□□□□ -0.12
FAM3BP58499 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
FAM3BP58499 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.29□□□□□ -0.12
FAM3BP58499 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.29□□□□□ -0.12
FAM3BP58499 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3BP58499 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.29□□□□□ -0.12
FAM3BP58499 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3BP58499 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.29□□□□□ -0.12
FAM3BP58499 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3BP58499 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.29□□□□□ -0.12
FAM3BP58499 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.28□□□□□ -0.12
FAM3BP58499 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3BP58499 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3BP58499 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3BP58499 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3BP58499 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3BP58499 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3BP58499 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3BP58499 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3BP58499 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
FAM3BP58499 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.28□□□□□ -0.12
FAM3BP58499 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
FAM3BP58499 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
FAM3BP58499 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.28□□□□□ -0.12
FAM3BP58499 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.28□□□□□ -0.12
FAM3BP58499 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.28□□□□□ -0.12
FAM3BP58499 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3BP58499 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.28□□□□□ -0.12
FAM3BP58499 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
FAM3BP58499 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC14.28□□□□□ -0.12
FAM3BP58499 AC010980.2-201ENST00000587099 1412 ntBASIC14.28□□□□□ -0.12
FAM3BP58499 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.28□□□□□ -0.12
FAM3BP58499 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.28□□□□□ -0.12
FAM3BP58499 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.28□□□□□ -0.12
FAM3BP58499 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
FAM3BP58499 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3BP58499 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3BP58499 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3BP58499 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3BP58499 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.27□□□□□ -0.12
FAM3BP58499 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3BP58499 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
FAM3BP58499 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3BP58499 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.27□□□□□ -0.12
FAM3BP58499 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.27□□□□□ -0.12
FAM3BP58499 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3BP58499 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3BP58499 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
FAM3BP58499 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.27□□□□□ -0.12
FAM3BP58499 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
FAM3BP58499 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.27□□□□□ -0.12
FAM3BP58499 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
FAM3BP58499 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
FAM3BP58499 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.27□□□□□ -0.12
FAM3BP58499 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3BP58499 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3BP58499 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
FAM3BP58499 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3BP58499 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3BP58499 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.27□□□□□ -0.12
FAM3BP58499 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.27□□□□□ -0.13
FAM3BP58499 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
FAM3BP58499 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
FAM3BP58499 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.27□□□□□ -0.13
FAM3BP58499 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.27□□□□□ -0.13
FAM3BP58499 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.27□□□□□ -0.13
FAM3BP58499 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.27□□□□□ -0.13
FAM3BP58499 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.27□□□□□ -0.13
FAM3BP58499 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.27□□□□□ -0.13
FAM3BP58499 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.27□□□□□ -0.13
FAM3BP58499 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.27□□□□□ -0.13
FAM3BP58499 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
FAM3BP58499 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FAM3BP58499 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FAM3BP58499 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
FAM3BP58499 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
FAM3BP58499 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.27□□□□□ -0.13
FAM3BP58499 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FAM3BP58499 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
FAM3BP58499 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
FAM3BP58499 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FAM3BP58499 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms