Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CMC4P56277 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMC4P56277 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC13.64□□□□□ -0.23
CMC4P56277 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
CMC4P56277 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMC4P56277 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMC4P56277 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMC4P56277 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.64□□□□□ -0.23
CMC4P56277 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CMC4P56277 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
CMC4P56277 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
CMC4P56277 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
CMC4P56277 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CMC4P56277 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMC4P56277 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC13.64□□□□□ -0.23
CMC4P56277 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.64□□□□□ -0.23
CMC4P56277 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CMC4P56277 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMC4P56277 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMC4P56277 HBZP1-201ENST00000354915 429 ntBASIC13.64□□□□□ -0.23
CMC4P56277 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.64□□□□□ -0.23
CMC4P56277 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.64□□□□□ -0.23
CMC4P56277 AC113404.2-201ENST00000507884 177 ntBASIC13.64□□□□□ -0.23
CMC4P56277 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
CMC4P56277 AL136038.3-201ENST00000561909 1096 ntBASIC13.64□□□□□ -0.23
CMC4P56277 NTF6B-201ENST00000591913 560 ntBASIC13.64□□□□□ -0.23
CMC4P56277 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.64□□□□□ -0.23
CMC4P56277 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.64□□□□□ -0.23
CMC4P56277 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CMC4P56277 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMC4P56277 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMC4P56277 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMC4P56277 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMC4P56277 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMC4P56277 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMC4P56277 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CMC4P56277 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMC4P56277 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMC4P56277 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CMC4P56277 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CMC4P56277 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.63□□□□□ -0.23
CMC4P56277 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMC4P56277 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMC4P56277 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.63□□□□□ -0.23
CMC4P56277 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMC4P56277 ARMC10P1-201ENST00000313754 855 ntBASIC13.63□□□□□ -0.23
CMC4P56277 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMC4P56277 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.63□□□□□ -0.23
CMC4P56277 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.63□□□□□ -0.23
CMC4P56277 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.63□□□□□ -0.23
CMC4P56277 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CMC4P56277 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
CMC4P56277 AC010331.1-201ENST00000611423 582 ntBASIC13.63□□□□□ -0.23
CMC4P56277 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.63□□□□□ -0.23
CMC4P56277 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.63□□□□□ -0.23
CMC4P56277 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC13.63□□□□□ -0.23
CMC4P56277 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CMC4P56277 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CMC4P56277 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMC4P56277 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMC4P56277 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMC4P56277 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CMC4P56277 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CMC4P56277 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CMC4P56277 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CMC4P56277 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CMC4P56277 OR6D1P-203ENST00000641209 4860 ntBASIC13.62□□□□□ -0.23
CMC4P56277 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMC4P56277 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMC4P56277 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMC4P56277 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMC4P56277 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
CMC4P56277 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CMC4P56277 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.62□□□□□ -0.23
CMC4P56277 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CMC4P56277 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CMC4P56277 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMC4P56277 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMC4P56277 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CMC4P56277 MIR662-201ENST00000384847 95 ntBASIC13.62□□□□□ -0.23
CMC4P56277 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMC4P56277 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.62□□□□□ -0.23
CMC4P56277 SPDYE15P-201ENST00000424157 909 ntBASIC13.62□□□□□ -0.23
CMC4P56277 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.62□□□□□ -0.23
CMC4P56277 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CMC4P56277 AP003733.1-201ENST00000491725 852 ntBASIC13.62□□□□□ -0.23
CMC4P56277 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.62□□□□□ -0.23
CMC4P56277 PPOX-214ENST00000535223 664 ntTSL 3 BASIC13.62□□□□□ -0.23
CMC4P56277 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC13.62□□□□□ -0.23
CMC4P56277 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.62□□□□□ -0.23
CMC4P56277 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.62□□□□□ -0.23
CMC4P56277 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.62□□□□□ -0.23
CMC4P56277 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.62□□□□□ -0.23
CMC4P56277 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.62□□□□□ -0.23
CMC4P56277 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.62□□□□□ -0.23
CMC4P56277 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.62□□□□□ -0.23
CMC4P56277 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.62□□□□□ -0.23
CMC4P56277 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMC4P56277 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMC4P56277 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms