Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H2P55055 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
NR1H2P55055 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H2P55055 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H2P55055 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H2P55055 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H2P55055 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H2P55055 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.38■□□□□ 0.37
NR1H2P55055 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H2P55055 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.38■□□□□ 0.37
NR1H2P55055 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H2P55055 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H2P55055 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H2P55055 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H2P55055 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.38■□□□□ 0.37
NR1H2P55055 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H2P55055 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.38■□□□□ 0.37
NR1H2P55055 AL121906.2-201ENST00000621597 723 ntBASIC17.38■□□□□ 0.37
NR1H2P55055 AC073912.3-201ENST00000624414 853 ntBASIC17.38■□□□□ 0.37
NR1H2P55055 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H2P55055 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NR1H2P55055 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
NR1H2P55055 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H2P55055 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.38■□□□□ 0.37
NR1H2P55055 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H2P55055 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H2P55055 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H2P55055 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.38■□□□□ 0.37
NR1H2P55055 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H2P55055 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
NR1H2P55055 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H2P55055 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H2P55055 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H2P55055 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H2P55055 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H2P55055 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.38■□□□□ 0.37
NR1H2P55055 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
NR1H2P55055 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H2P55055 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H2P55055 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.37■□□□□ 0.37
NR1H2P55055 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H2P55055 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H2P55055 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H2P55055 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H2P55055 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H2P55055 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.37■□□□□ 0.37
NR1H2P55055 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H2P55055 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NR1H2P55055 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.37■□□□□ 0.37
NR1H2P55055 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H2P55055 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H2P55055 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NR1H2P55055 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
NR1H2P55055 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.37■□□□□ 0.37
NR1H2P55055 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.37■□□□□ 0.37
NR1H2P55055 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.37■□□□□ 0.37
NR1H2P55055 MIR4785-201ENST00000585005 73 ntBASIC17.37■□□□□ 0.37
NR1H2P55055 AL049637.2-201ENST00000641778 930 ntBASIC17.37■□□□□ 0.37
NR1H2P55055 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H2P55055 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H2P55055 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H2P55055 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
NR1H2P55055 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H2P55055 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H2P55055 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H2P55055 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H2P55055 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NR1H2P55055 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H2P55055 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H2P55055 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NR1H2P55055 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H2P55055 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NR1H2P55055 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
NR1H2P55055 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.37■□□□□ 0.37
NR1H2P55055 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H2P55055 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H2P55055 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H2P55055 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H2P55055 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.36■□□□□ 0.37
NR1H2P55055 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
NR1H2P55055 AC138028.4-201ENST00000564984 1845 ntBASIC17.36■□□□□ 0.37
NR1H2P55055 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H2P55055 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H2P55055 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H2P55055 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H2P55055 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H2P55055 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.36■□□□□ 0.37
NR1H2P55055 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.36■□□□□ 0.37
NR1H2P55055 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.36■□□□□ 0.37
NR1H2P55055 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.36■□□□□ 0.37
NR1H2P55055 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H2P55055 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H2P55055 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H2P55055 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.36■□□□□ 0.37
NR1H2P55055 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.36■□□□□ 0.37
NR1H2P55055 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NR1H2P55055 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NR1H2P55055 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.36■□□□□ 0.37
NR1H2P55055 AL391005.1-201ENST00000623953 2435 ntBASIC17.36■□□□□ 0.37
NR1H2P55055 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms