Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC22.37■■□□□ 1.17
PDE1AP54750 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDE1AP54750 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC22.37■■□□□ 1.17
PDE1AP54750 TK2-213ENST00000563369 882 ntTSL 5 BASIC22.37■■□□□ 1.17
PDE1AP54750 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC22.37■■□□□ 1.17
PDE1AP54750 LINC01023-201ENST00000606054 436 ntBASIC22.37■■□□□ 1.17
PDE1AP54750 AC139887.4-201ENST00000607877 719 ntBASIC22.37■■□□□ 1.17
PDE1AP54750 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDE1AP54750 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDE1AP54750 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC22.37■■□□□ 1.17
PDE1AP54750 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDE1AP54750 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
PDE1AP54750 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC22.37■■□□□ 1.17
PDE1AP54750 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDE1AP54750 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
PDE1AP54750 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
PDE1AP54750 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PDE1AP54750 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDE1AP54750 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC22.36■■□□□ 1.17
PDE1AP54750 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDE1AP54750 PBK-203ENST00000522944 1499 ntTSL 2 BASIC22.36■■□□□ 1.17
PDE1AP54750 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDE1AP54750 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC22.36■■□□□ 1.17
PDE1AP54750 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDE1AP54750 AC117947.1-201ENST00000427448 529 ntBASIC22.36■■□□□ 1.17
PDE1AP54750 BX664615.1-201ENST00000443558 458 ntBASIC22.36■■□□□ 1.17
PDE1AP54750 KRT18P57-201ENST00000443599 1254 ntBASIC22.36■■□□□ 1.17
PDE1AP54750 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC22.36■■□□□ 1.17
PDE1AP54750 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PDE1AP54750 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDE1AP54750 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDE1AP54750 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC22.36■■□□□ 1.17
PDE1AP54750 AC140113.3-201ENST00000605663 199 ntBASIC22.36■■□□□ 1.17
PDE1AP54750 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
PDE1AP54750 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
PDE1AP54750 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
PDE1AP54750 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDE1AP54750 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC22.36■■□□□ 1.17
PDE1AP54750 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PDE1AP54750 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDE1AP54750 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDE1AP54750 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC22.36■■□□□ 1.17
PDE1AP54750 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PDE1AP54750 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDE1AP54750 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDE1AP54750 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PDE1AP54750 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC22.35■■□□□ 1.17
PDE1AP54750 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC22.35■■□□□ 1.17
PDE1AP54750 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDE1AP54750 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
PDE1AP54750 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDE1AP54750 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PDE1AP54750 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDE1AP54750 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC22.35■■□□□ 1.17
PDE1AP54750 ANKRD20A18P-201ENST00000359341 492 ntBASIC22.35■■□□□ 1.17
PDE1AP54750 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDE1AP54750 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC22.35■■□□□ 1.17
PDE1AP54750 YBX1P2-201ENST00000489612 999 ntBASIC22.35■■□□□ 1.17
PDE1AP54750 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
PDE1AP54750 USF2-205ENST00000594064 1179 ntTSL 2 BASIC22.35■■□□□ 1.17
PDE1AP54750 AC079602.3-201ENST00000623931 403 ntBASIC22.35■■□□□ 1.17
PDE1AP54750 AL031432.5-201ENST00000641059 760 ntBASIC22.35■■□□□ 1.17
PDE1AP54750 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC22.35■■□□□ 1.17
PDE1AP54750 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDE1AP54750 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDE1AP54750 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PDE1AP54750 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDE1AP54750 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC22.35■■□□□ 1.17
PDE1AP54750 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
PDE1AP54750 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDE1AP54750 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDE1AP54750 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PDE1AP54750 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDE1AP54750 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PDE1AP54750 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDE1AP54750 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PDE1AP54750 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PDE1AP54750 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDE1AP54750 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDE1AP54750 RASA4DP-201ENST00000460726 1199 ntBASIC22.34■■□□□ 1.17
PDE1AP54750 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC22.34■■□□□ 1.17
PDE1AP54750 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC22.34■■□□□ 1.17
PDE1AP54750 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC22.34■■□□□ 1.17
PDE1AP54750 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PDE1AP54750 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDE1AP54750 AP000997.3-201ENST00000623333 2250 ntBASIC22.34■■□□□ 1.17
PDE1AP54750 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDE1AP54750 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC22.34■■□□□ 1.17
PDE1AP54750 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDE1AP54750 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PDE1AP54750 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
PDE1AP54750 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDE1AP54750 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDE1AP54750 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
PDE1AP54750 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PDE1AP54750 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDE1AP54750 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC22.33■■□□□ 1.17
PDE1AP54750 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDE1AP54750 AC020763.4-201ENST00000623414 4170 ntBASIC22.33■■□□□ 1.17
PDE1AP54750 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms