Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC25A1P53007 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC25A1P53007 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC25A1P53007 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC25A1P53007 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC25A1P53007 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC25A1P53007 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC25A1P53007 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC25A1P53007 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC25A1P53007 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC25A1P53007 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.28■□□□□ 0.2
SLC25A1P53007 AP003071.4-201ENST00000562276 1284 ntBASIC16.28■□□□□ 0.2
SLC25A1P53007 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC25A1P53007 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SLC25A1P53007 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC25A1P53007 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC25A1P53007 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC25A1P53007 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SLC25A1P53007 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC25A1P53007 KRT18P55-202ENST00000578578 1546 ntBASIC16.28■□□□□ 0.2
SLC25A1P53007 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC25A1P53007 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SLC25A1P53007 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SLC25A1P53007 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC25A1P53007 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC25A1P53007 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC25A1P53007 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SLC25A1P53007 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SLC25A1P53007 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC25A1P53007 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SLC25A1P53007 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC25A1P53007 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC25A1P53007 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC25A1P53007 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC25A1P53007 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SLC25A1P53007 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC25A1P53007 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC25A1P53007 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC25A1P53007 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC25A1P53007 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC25A1P53007 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
SLC25A1P53007 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC25A1P53007 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC25A1P53007 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC25A1P53007 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC25A1P53007 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.27■□□□□ 0.2
SLC25A1P53007 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC25A1P53007 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC25A1P53007 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC25A1P53007 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.27■□□□□ 0.2
SLC25A1P53007 AC104390.1-201ENST00000555663 520 ntBASIC16.27■□□□□ 0.2
SLC25A1P53007 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.27■□□□□ 0.2
SLC25A1P53007 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
SLC25A1P53007 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC25A1P53007 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC25A1P53007 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC25A1P53007 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SLC25A1P53007 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC25A1P53007 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC25A1P53007 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC25A1P53007 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SLC25A1P53007 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC25A1P53007 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
SLC25A1P53007 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC25A1P53007 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.27■□□□□ 0.19
SLC25A1P53007 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SLC25A1P53007 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
SLC25A1P53007 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC25A1P53007 AC092338.2-201ENST00000568827 1415 ntBASIC16.27■□□□□ 0.19
SLC25A1P53007 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
SLC25A1P53007 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SLC25A1P53007 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC25A1P53007 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SLC25A1P53007 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SLC25A1P53007 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC25A1P53007 AC006116.8-202ENST00000587620 1550 ntBASIC16.26■□□□□ 0.19
SLC25A1P53007 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC25A1P53007 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC25A1P53007 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC25A1P53007 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC25A1P53007 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SLC25A1P53007 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC25A1P53007 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC25A1P53007 UNC93B2-201ENST00000285383 730 ntBASIC16.26■□□□□ 0.19
SLC25A1P53007 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC25A1P53007 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC25A1P53007 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC25A1P53007 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC25A1P53007 CCR12P-201ENST00000446203 998 ntBASIC16.26■□□□□ 0.19
SLC25A1P53007 RBM17P1-201ENST00000453646 1190 ntBASIC16.26■□□□□ 0.19
SLC25A1P53007 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.26■□□□□ 0.19
SLC25A1P53007 BX088651.1-201ENST00000540551 451 ntBASIC16.26■□□□□ 0.19
SLC25A1P53007 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC25A1P53007 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.26■□□□□ 0.19
SLC25A1P53007 Z99916.2-201ENST00000604037 246 ntBASIC16.26■□□□□ 0.19
SLC25A1P53007 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC25A1P53007 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC25A1P53007 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC25A1P53007 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC25A1P53007 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms