Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP11P51784 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.67■□□□□ 0.9
USP11P51784 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP11P51784 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.67■□□□□ 0.9
USP11P51784 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP11P51784 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.67■□□□□ 0.9
USP11P51784 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.67■□□□□ 0.9
USP11P51784 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
USP11P51784 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.67■□□□□ 0.9
USP11P51784 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP11P51784 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP11P51784 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP11P51784 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.67■□□□□ 0.9
USP11P51784 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP11P51784 Z83836.1-201ENST00000624605 1642 ntBASIC20.67■□□□□ 0.9
USP11P51784 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
USP11P51784 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP11P51784 AC093677.2-201ENST00000600169 1863 ntBASIC20.67■□□□□ 0.9
USP11P51784 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP11P51784 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
USP11P51784 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
USP11P51784 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP11P51784 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP11P51784 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.66■□□□□ 0.9
USP11P51784 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP11P51784 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
USP11P51784 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
USP11P51784 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP11P51784 TSPY22P-201ENST00000427496 604 ntBASIC20.66■□□□□ 0.9
USP11P51784 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
USP11P51784 KRT8P26-201ENST00000534154 1276 ntBASIC20.66■□□□□ 0.9
USP11P51784 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP11P51784 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.66■□□□□ 0.9
USP11P51784 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
USP11P51784 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
USP11P51784 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.66■□□□□ 0.9
USP11P51784 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP11P51784 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP11P51784 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP11P51784 PHGDH-209ENST00000641074 1780 ntBASIC20.66■□□□□ 0.9
USP11P51784 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP11P51784 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
USP11P51784 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP11P51784 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP11P51784 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
USP11P51784 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP11P51784 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.65■□□□□ 0.9
USP11P51784 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.65■□□□□ 0.9
USP11P51784 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP11P51784 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP11P51784 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
USP11P51784 AL353692.3-201ENST00000407031 1396 ntBASIC20.65■□□□□ 0.9
USP11P51784 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP11P51784 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.65■□□□□ 0.9
USP11P51784 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP11P51784 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.65■□□□□ 0.9
USP11P51784 AC004263.2-201ENST00000617183 678 ntBASIC20.65■□□□□ 0.9
USP11P51784 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.65■□□□□ 0.9
USP11P51784 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.65■□□□□ 0.9
USP11P51784 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP11P51784 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.65■□□□□ 0.9
USP11P51784 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP11P51784 AC104581.1-202ENST00000635932 2618 ntBASIC20.65■□□□□ 0.9
USP11P51784 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
USP11P51784 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP11P51784 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.65■□□□□ 0.9
USP11P51784 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.64■□□□□ 0.9
USP11P51784 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
USP11P51784 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
USP11P51784 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
USP11P51784 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
USP11P51784 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
USP11P51784 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
USP11P51784 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
USP11P51784 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
USP11P51784 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
USP11P51784 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP11P51784 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP11P51784 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.64■□□□□ 0.89
USP11P51784 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP11P51784 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP11P51784 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.64■□□□□ 0.89
USP11P51784 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP11P51784 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.64■□□□□ 0.89
USP11P51784 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.64■□□□□ 0.89
USP11P51784 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.64■□□□□ 0.89
USP11P51784 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.64■□□□□ 0.89
USP11P51784 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP11P51784 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP11P51784 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP11P51784 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
USP11P51784 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP11P51784 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.64■□□□□ 0.89
USP11P51784 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
USP11P51784 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.64■□□□□ 0.89
USP11P51784 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.64■□□□□ 0.89
USP11P51784 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP11P51784 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP11P51784 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP11P51784 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms