Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB28P51157 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB28P51157 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB28P51157 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB28P51157 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB28P51157 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB28P51157 IER3-202ENST00000376377 1350 ntBASIC17.66■□□□□ 0.42
RAB28P51157 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB28P51157 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RAB28P51157 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB28P51157 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB28P51157 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB28P51157 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RAB28P51157 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB28P51157 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RAB28P51157 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB28P51157 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB28P51157 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
RAB28P51157 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB28P51157 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB28P51157 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.66■□□□□ 0.42
RAB28P51157 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB28P51157 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB28P51157 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB28P51157 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.66■□□□□ 0.42
RAB28P51157 AC091076.1-201ENST00000610741 619 ntBASIC17.66■□□□□ 0.42
RAB28P51157 AC116407.4-201ENST00000623319 1061 ntBASIC17.66■□□□□ 0.42
RAB28P51157 AL358472.4-201ENST00000633140 710 ntBASIC17.66■□□□□ 0.42
RAB28P51157 AP000550.4-202ENST00000639755 178 ntBASIC17.66■□□□□ 0.42
RAB28P51157 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB28P51157 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB28P51157 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB28P51157 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB28P51157 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB28P51157 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
RAB28P51157 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB28P51157 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB28P51157 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB28P51157 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB28P51157 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB28P51157 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.66■□□□□ 0.42
RAB28P51157 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RAB28P51157 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB28P51157 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB28P51157 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RAB28P51157 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB28P51157 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB28P51157 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB28P51157 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB28P51157 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB28P51157 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB28P51157 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB28P51157 AL020996.1-203ENST00000536896 2307 ntBASIC17.65■□□□□ 0.42
RAB28P51157 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB28P51157 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB28P51157 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB28P51157 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB28P51157 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB28P51157 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB28P51157 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB28P51157 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB28P51157 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB28P51157 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB28P51157 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB28P51157 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RAB28P51157 AC113404.2-201ENST00000507884 177 ntBASIC17.65■□□□□ 0.42
RAB28P51157 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.65■□□□□ 0.42
RAB28P51157 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.65■□□□□ 0.42
RAB28P51157 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB28P51157 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.65■□□□□ 0.42
RAB28P51157 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB28P51157 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.65■□□□□ 0.42
RAB28P51157 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB28P51157 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB28P51157 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB28P51157 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB28P51157 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB28P51157 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB28P51157 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RAB28P51157 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.64■□□□□ 0.42
RAB28P51157 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB28P51157 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RAB28P51157 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RAB28P51157 AC104581.1-202ENST00000635932 2618 ntBASIC17.64■□□□□ 0.41
RAB28P51157 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB28P51157 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RAB28P51157 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB28P51157 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB28P51157 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RAB28P51157 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB28P51157 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RAB28P51157 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB28P51157 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB28P51157 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.64■□□□□ 0.41
RAB28P51157 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB28P51157 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB28P51157 IGHGP-201ENST00000390555 1178 ntBASIC17.64■□□□□ 0.41
RAB28P51157 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB28P51157 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.64■□□□□ 0.41
RAB28P51157 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms