Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
RNF144AP50876 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF144AP50876 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF144AP50876 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF144AP50876 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF144AP50876 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF144AP50876 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF144AP50876 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.03■□□□□ 0.32
RNF144AP50876 AC009947.2-201ENST00000444014 672 ntBASIC17.03■□□□□ 0.32
RNF144AP50876 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF144AP50876 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF144AP50876 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
RNF144AP50876 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF144AP50876 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF144AP50876 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF144AP50876 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF144AP50876 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF144AP50876 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF144AP50876 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF144AP50876 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF144AP50876 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF144AP50876 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RNF144AP50876 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF144AP50876 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF144AP50876 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF144AP50876 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF144AP50876 AC034236.2-201ENST00000606662 1610 ntBASIC17.03■□□□□ 0.32
RNF144AP50876 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RNF144AP50876 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF144AP50876 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF144AP50876 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF144AP50876 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF144AP50876 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
RNF144AP50876 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RNF144AP50876 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF144AP50876 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF144AP50876 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF144AP50876 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF144AP50876 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RNF144AP50876 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF144AP50876 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF144AP50876 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
RNF144AP50876 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.02■□□□□ 0.32
RNF144AP50876 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF144AP50876 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF144AP50876 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF144AP50876 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
RNF144AP50876 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF144AP50876 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF144AP50876 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RNF144AP50876 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RNF144AP50876 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.02■□□□□ 0.31
RNF144AP50876 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF144AP50876 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF144AP50876 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF144AP50876 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF144AP50876 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF144AP50876 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF144AP50876 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF144AP50876 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF144AP50876 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF144AP50876 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RNF144AP50876 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RNF144AP50876 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF144AP50876 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RNF144AP50876 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF144AP50876 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF144AP50876 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
RNF144AP50876 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
RNF144AP50876 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF144AP50876 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF144AP50876 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF144AP50876 AC020916.1-201ENST00000587762 1774 ntBASIC17.01■□□□□ 0.31
RNF144AP50876 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF144AP50876 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF144AP50876 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF144AP50876 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF144AP50876 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF144AP50876 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF144AP50876 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF144AP50876 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF144AP50876 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF144AP50876 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF144AP50876 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF144AP50876 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF144AP50876 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF144AP50876 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF144AP50876 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17■□□□□ 0.31
RNF144AP50876 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF144AP50876 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF144AP50876 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF144AP50876 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17■□□□□ 0.31
RNF144AP50876 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF144AP50876 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
RNF144AP50876 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF144AP50876 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF144AP50876 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17■□□□□ 0.31
RNF144AP50876 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17■□□□□ 0.31
RNF144AP50876 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17■□□□□ 0.31
RNF144AP50876 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms