Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC9A3P48764 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SLC9A3P48764 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC9A3P48764 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC9A3P48764 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
SLC9A3P48764 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
SLC9A3P48764 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC9A3P48764 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC9A3P48764 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC9A3P48764 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC9A3P48764 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC9A3P48764 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC9A3P48764 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC9A3P48764 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC9A3P48764 MYLKP1-201ENST00000509077 1580 ntBASIC16.81■□□□□ 0.28
SLC9A3P48764 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC9A3P48764 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC9A3P48764 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC9A3P48764 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC9A3P48764 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC9A3P48764 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC9A3P48764 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC9A3P48764 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SLC9A3P48764 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC9A3P48764 FAM197Y1-201ENST00000421178 764 ntBASIC16.81■□□□□ 0.28
SLC9A3P48764 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC9A3P48764 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC9A3P48764 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC9A3P48764 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC9A3P48764 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC9A3P48764 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.81■□□□□ 0.28
SLC9A3P48764 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC9A3P48764 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC9A3P48764 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC9A3P48764 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC9A3P48764 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC9A3P48764 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC9A3P48764 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC9A3P48764 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC9A3P48764 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC9A3P48764 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC9A3P48764 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SLC9A3P48764 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC9A3P48764 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC9A3P48764 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC9A3P48764 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC9A3P48764 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC9A3P48764 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SLC9A3P48764 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC9A3P48764 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC9A3P48764 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC9A3P48764 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC9A3P48764 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC9A3P48764 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC9A3P48764 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
SLC9A3P48764 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC9A3P48764 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC9A3P48764 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC9A3P48764 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC9A3P48764 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.8■□□□□ 0.28
SLC9A3P48764 AC116562.2-201ENST00000507042 360 ntBASIC16.8■□□□□ 0.28
SLC9A3P48764 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC9A3P48764 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.8■□□□□ 0.28
SLC9A3P48764 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC9A3P48764 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC9A3P48764 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC9A3P48764 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC9A3P48764 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC9A3P48764 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC9A3P48764 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SLC9A3P48764 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC9A3P48764 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC9A3P48764 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC9A3P48764 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SLC9A3P48764 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC9A3P48764 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
SLC9A3P48764 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
SLC9A3P48764 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC9A3P48764 AC008556.1-201ENST00000610908 2040 ntBASIC16.79■□□□□ 0.28
SLC9A3P48764 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC9A3P48764 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC9A3P48764 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC9A3P48764 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC9A3P48764 CA15P1-201ENST00000481698 905 ntBASIC16.79■□□□□ 0.28
SLC9A3P48764 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC9A3P48764 NUDT16P1-203ENST00000513809 620 ntBASIC16.79■□□□□ 0.28
SLC9A3P48764 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC9A3P48764 AP001412.1-201ENST00000608405 714 ntBASIC16.79■□□□□ 0.28
SLC9A3P48764 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC9A3P48764 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC9A3P48764 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC9A3P48764 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC9A3P48764 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC9A3P48764 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
SLC9A3P48764 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC9A3P48764 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC9A3P48764 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC9A3P48764 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC9A3P48764 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC9A3P48764 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms