Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.32■□□□□ 0.2
CSNK1A1P48729 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1A1P48729 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CSNK1A1P48729 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CSNK1A1P48729 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.32■□□□□ 0.2
CSNK1A1P48729 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.32■□□□□ 0.2
CSNK1A1P48729 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.32■□□□□ 0.2
CSNK1A1P48729 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.32■□□□□ 0.2
CSNK1A1P48729 LINC01023-201ENST00000606054 436 ntBASIC16.32■□□□□ 0.2
CSNK1A1P48729 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.32■□□□□ 0.2
CSNK1A1P48729 AL138966.2-201ENST00000621997 464 ntBASIC16.32■□□□□ 0.2
CSNK1A1P48729 AC092865.7-201ENST00000641832 219 ntBASIC16.32■□□□□ 0.2
CSNK1A1P48729 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1A1P48729 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1A1P48729 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CSNK1A1P48729 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1A1P48729 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1A1P48729 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1A1P48729 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1A1P48729 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1A1P48729 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1A1P48729 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1A1P48729 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1A1P48729 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1A1P48729 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1A1P48729 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1A1P48729 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1A1P48729 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.31■□□□□ 0.2
CSNK1A1P48729 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1A1P48729 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CSNK1A1P48729 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1A1P48729 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CSNK1A1P48729 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1A1P48729 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CSNK1A1P48729 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1A1P48729 SEC1P-202ENST00000473944 940 ntBASIC16.31■□□□□ 0.2
CSNK1A1P48729 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1A1P48729 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1A1P48729 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CSNK1A1P48729 AC010203.1-204ENST00000548782 407 ntBASIC16.31■□□□□ 0.2
CSNK1A1P48729 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.31■□□□□ 0.2
CSNK1A1P48729 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CSNK1A1P48729 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1A1P48729 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CSNK1A1P48729 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.31■□□□□ 0.2
CSNK1A1P48729 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1A1P48729 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1A1P48729 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1A1P48729 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1A1P48729 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1A1P48729 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CSNK1A1P48729 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1A1P48729 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CSNK1A1P48729 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1A1P48729 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1A1P48729 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CSNK1A1P48729 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1A1P48729 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1A1P48729 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1A1P48729 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CSNK1A1P48729 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CSNK1A1P48729 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.3■□□□□ 0.2
CSNK1A1P48729 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CSNK1A1P48729 GMCL1P1-201ENST00000463439 1581 ntBASIC16.3■□□□□ 0.2
CSNK1A1P48729 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1A1P48729 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.3■□□□□ 0.2
CSNK1A1P48729 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1A1P48729 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.3■□□□□ 0.2
CSNK1A1P48729 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CSNK1A1P48729 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1A1P48729 BICD1-207ENST00000551848 1962 ntBASIC16.3■□□□□ 0.2
CSNK1A1P48729 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1A1P48729 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1A1P48729 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1A1P48729 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1A1P48729 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.3■□□□□ 0.2
CSNK1A1P48729 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.3■□□□□ 0.2
CSNK1A1P48729 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.3■□□□□ 0.2
CSNK1A1P48729 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.3■□□□□ 0.2
CSNK1A1P48729 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1A1P48729 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.3■□□□□ 0.2
CSNK1A1P48729 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CSNK1A1P48729 AC140113.3-201ENST00000605663 199 ntBASIC16.3■□□□□ 0.2
CSNK1A1P48729 AC099343.3-201ENST00000605834 2503 ntBASIC16.3■□□□□ 0.2
CSNK1A1P48729 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1A1P48729 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1A1P48729 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1A1P48729 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CSNK1A1P48729 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.3■□□□□ 0.2
CSNK1A1P48729 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1A1P48729 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1A1P48729 AC135050.7-201ENST00000624508 2218 ntBASIC16.3■□□□□ 0.2
CSNK1A1P48729 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1A1P48729 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1A1P48729 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1A1P48729 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CSNK1A1P48729 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.29■□□□□ 0.2
CSNK1A1P48729 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.29■□□□□ 0.2
CSNK1A1P48729 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1A1P48729 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms