Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
PCP4P48539 DGCR9-201ENST00000609630 2415 ntBASIC12.6□□□□□ -0.39
PCP4P48539 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.6□□□□□ -0.39
PCP4P48539 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PCP4P48539 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
PCP4P48539 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
PCP4P48539 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PCP4P48539 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.6□□□□□ -0.39
PCP4P48539 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
PCP4P48539 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PCP4P48539 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.6□□□□□ -0.39
PCP4P48539 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PCP4P48539 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
PCP4P48539 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PCP4P48539 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PCP4P48539 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
PCP4P48539 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC12.6□□□□□ -0.39
PCP4P48539 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
PCP4P48539 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC12.6□□□□□ -0.39
PCP4P48539 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC12.6□□□□□ -0.39
PCP4P48539 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
PCP4P48539 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
PCP4P48539 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PCP4P48539 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PCP4P48539 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PCP4P48539 PARN-205ENST00000539279 1557 ntTSL 2 BASIC12.6□□□□□ -0.39
PCP4P48539 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
PCP4P48539 MEST-211ENST00000437945 1455 ntTSL 5 BASIC12.59□□□□□ -0.39
PCP4P48539 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC12.59□□□□□ -0.39
PCP4P48539 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.59□□□□□ -0.39
PCP4P48539 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCP4P48539 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.59□□□□□ -0.39
PCP4P48539 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
PCP4P48539 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCP4P48539 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
PCP4P48539 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
PCP4P48539 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCP4P48539 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCP4P48539 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
PCP4P48539 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCP4P48539 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
PCP4P48539 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCP4P48539 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCP4P48539 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCP4P48539 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
PCP4P48539 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCP4P48539 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC12.59□□□□□ -0.39
PCP4P48539 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCP4P48539 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PCP4P48539 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
PCP4P48539 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
PCP4P48539 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.59□□□□□ -0.39
PCP4P48539 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
PCP4P48539 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
PCP4P48539 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
PCP4P48539 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
PCP4P48539 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCP4P48539 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCP4P48539 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCP4P48539 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCP4P48539 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.59□□□□□ -0.39
PCP4P48539 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
PCP4P48539 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.59□□□□□ -0.39
PCP4P48539 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCP4P48539 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCP4P48539 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCP4P48539 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
PCP4P48539 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCP4P48539 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.59□□□□□ -0.39
PCP4P48539 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PCP4P48539 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
PCP4P48539 HSPA7-201ENST00000445535 1927 ntBASIC12.58□□□□□ -0.39
PCP4P48539 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
PCP4P48539 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.58□□□□□ -0.4
PCP4P48539 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
PCP4P48539 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
PCP4P48539 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCP4P48539 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PCP4P48539 AL357033.4-201ENST00000617703 1807 ntBASIC12.58□□□□□ -0.4
PCP4P48539 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCP4P48539 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCP4P48539 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCP4P48539 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC12.58□□□□□ -0.4
PCP4P48539 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCP4P48539 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
PCP4P48539 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PCP4P48539 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.58□□□□□ -0.4
PCP4P48539 AC131902.2-201ENST00000566892 2172 ntBASIC12.58□□□□□ -0.4
PCP4P48539 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.58□□□□□ -0.4
PCP4P48539 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12.58□□□□□ -0.4
PCP4P48539 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
PCP4P48539 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCP4P48539 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCP4P48539 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCP4P48539 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCP4P48539 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCP4P48539 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
PCP4P48539 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
PCP4P48539 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCP4P48539 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms