Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A3P43003 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A3P43003 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A3P43003 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A3P43003 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A3P43003 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A3P43003 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A3P43003 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A3P43003 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A3P43003 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC1A3P43003 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC1A3P43003 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A3P43003 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A3P43003 INGX-201ENST00000359239 846 ntBASIC16.85■□□□□ 0.29
SLC1A3P43003 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A3P43003 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC1A3P43003 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
SLC1A3P43003 AL512604.3-201ENST00000569583 964 ntBASIC16.85■□□□□ 0.29
SLC1A3P43003 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC1A3P43003 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC1A3P43003 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC1A3P43003 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A3P43003 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A3P43003 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A3P43003 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SLC1A3P43003 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A3P43003 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A3P43003 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC1A3P43003 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
SLC1A3P43003 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A3P43003 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC1A3P43003 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A3P43003 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SLC1A3P43003 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC1A3P43003 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SLC1A3P43003 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A3P43003 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A3P43003 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
SLC1A3P43003 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC1A3P43003 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC1A3P43003 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.84■□□□□ 0.29
SLC1A3P43003 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC1A3P43003 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC1A3P43003 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SLC1A3P43003 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC1A3P43003 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.84■□□□□ 0.29
SLC1A3P43003 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC1A3P43003 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC1A3P43003 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC1A3P43003 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
SLC1A3P43003 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLC1A3P43003 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC1A3P43003 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC1A3P43003 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SLC1A3P43003 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A3P43003 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SLC1A3P43003 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC1A3P43003 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A3P43003 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A3P43003 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A3P43003 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A3P43003 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A3P43003 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A3P43003 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SLC1A3P43003 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A3P43003 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC1A3P43003 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC1A3P43003 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A3P43003 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC1A3P43003 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A3P43003 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A3P43003 KRT18P23-201ENST00000435622 1283 ntBASIC16.83■□□□□ 0.28
SLC1A3P43003 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.83■□□□□ 0.28
SLC1A3P43003 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms