Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL15A1P39059 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL15A1P39059 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COL15A1P39059 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL15A1P39059 ASL-204ENST00000395331 1538 ntTSL 5 BASIC23.16■■□□□ 1.3
COL15A1P39059 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC23.16■■□□□ 1.3
COL15A1P39059 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL15A1P39059 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COL15A1P39059 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC23.15■■□□□ 1.3
COL15A1P39059 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL15A1P39059 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL15A1P39059 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL15A1P39059 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC23.15■■□□□ 1.3
COL15A1P39059 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL15A1P39059 MEG3-211ENST00000452514 461 ntTSL 3 BASIC23.15■■□□□ 1.3
COL15A1P39059 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC23.15■■□□□ 1.3
COL15A1P39059 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL15A1P39059 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC23.15■■□□□ 1.3
COL15A1P39059 AL024508.2-201ENST00000607749 1894 ntBASIC23.15■■□□□ 1.3
COL15A1P39059 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL15A1P39059 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL15A1P39059 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC23.15■■□□□ 1.3
COL15A1P39059 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL15A1P39059 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL15A1P39059 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL15A1P39059 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL15A1P39059 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL15A1P39059 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
COL15A1P39059 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL15A1P39059 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL15A1P39059 MED16-201ENST00000269814 1199 ntTSL 5 BASIC23.14■■□□□ 1.3
COL15A1P39059 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL15A1P39059 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
COL15A1P39059 HNRNPDP1-201ENST00000439535 754 ntBASIC23.14■■□□□ 1.3
COL15A1P39059 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC23.14■■□□□ 1.3
COL15A1P39059 AC092865.5-201ENST00000545435 363 ntBASIC23.14■■□□□ 1.3
COL15A1P39059 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
COL15A1P39059 PRKN-208ENST00000610470 531 ntTSL 2 BASIC23.14■■□□□ 1.3
COL15A1P39059 PRKN-209ENST00000612485 225 ntTSL 5 BASIC23.14■■□□□ 1.3
COL15A1P39059 AC099343.3-201ENST00000605834 2503 ntBASIC23.14■■□□□ 1.3
COL15A1P39059 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL15A1P39059 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL15A1P39059 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC23.14■■□□□ 1.3
COL15A1P39059 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC23.14■■□□□ 1.3
COL15A1P39059 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL15A1P39059 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL15A1P39059 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
COL15A1P39059 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
COL15A1P39059 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
COL15A1P39059 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC23.14■■□□□ 1.29
COL15A1P39059 SCARNA2-201ENST00000458748 420 ntBASIC23.14■■□□□ 1.29
COL15A1P39059 AC068472.1-201ENST00000474589 881 ntBASIC23.14■■□□□ 1.29
COL15A1P39059 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC23.14■■□□□ 1.29
COL15A1P39059 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
COL15A1P39059 AL138831.2-201ENST00000606564 490 ntBASIC23.14■■□□□ 1.29
COL15A1P39059 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC23.14■■□□□ 1.29
COL15A1P39059 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
COL15A1P39059 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL15A1P39059 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC23.13■■□□□ 1.29
COL15A1P39059 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL15A1P39059 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
COL15A1P39059 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
COL15A1P39059 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL15A1P39059 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
COL15A1P39059 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC23.13■■□□□ 1.29
COL15A1P39059 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
COL15A1P39059 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC23.13■■□□□ 1.29
COL15A1P39059 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
COL15A1P39059 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL15A1P39059 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC23.13■■□□□ 1.29
COL15A1P39059 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC23.13■■□□□ 1.29
COL15A1P39059 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC23.13■■□□□ 1.29
COL15A1P39059 MTDHP3-201ENST00000594186 672 ntBASIC23.13■■□□□ 1.29
COL15A1P39059 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
COL15A1P39059 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL15A1P39059 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL15A1P39059 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC23.12■■□□□ 1.29
COL15A1P39059 PAN3-AS1-201ENST00000563843 1351 ntBASIC23.12■■□□□ 1.29
COL15A1P39059 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL15A1P39059 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL15A1P39059 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC23.12■■□□□ 1.29
COL15A1P39059 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC23.12■■□□□ 1.29
COL15A1P39059 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC23.12■■□□□ 1.29
COL15A1P39059 COBL-210ENST00000632460 1941 ntTSL 5 BASIC23.12■■□□□ 1.29
COL15A1P39059 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL15A1P39059 MIR1233-2-201ENST00000408138 82 ntBASIC23.12■■□□□ 1.29
COL15A1P39059 MIR1233-1-201ENST00000408722 82 ntBASIC23.12■■□□□ 1.29
COL15A1P39059 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC23.12■■□□□ 1.29
COL15A1P39059 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC23.12■■□□□ 1.29
COL15A1P39059 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC23.12■■□□□ 1.29
COL15A1P39059 PAM16-208ENST00000573553 722 ntTSL 2 BASIC23.12■■□□□ 1.29
COL15A1P39059 PIN1-206ENST00000587625 878 ntTSL 2 BASIC23.12■■□□□ 1.29
COL15A1P39059 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC23.12■■□□□ 1.29
COL15A1P39059 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL15A1P39059 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL15A1P39059 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL15A1P39059 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL15A1P39059 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC23.12■■□□□ 1.29
COL15A1P39059 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL15A1P39059 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms