Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HOXC8P31273 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HOXC8P31273 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
HOXC8P31273 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC8P31273 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC8P31273 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.93■□□□□ 0.78
HOXC8P31273 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.93■□□□□ 0.78
HOXC8P31273 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC8P31273 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
HOXC8P31273 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC8P31273 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.93■□□□□ 0.78
HOXC8P31273 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HOXC8P31273 ABCD1P5-201ENST00000445663 754 ntBASIC19.93■□□□□ 0.78
HOXC8P31273 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.93■□□□□ 0.78
HOXC8P31273 AC112698.1-201ENST00000510299 916 ntBASIC19.93■□□□□ 0.78
HOXC8P31273 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC8P31273 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC8P31273 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.93■□□□□ 0.78
HOXC8P31273 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
HOXC8P31273 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
HOXC8P31273 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC8P31273 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC8P31273 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.93■□□□□ 0.78
HOXC8P31273 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC8P31273 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXC8P31273 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC8P31273 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.92■□□□□ 0.78
HOXC8P31273 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
HOXC8P31273 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC8P31273 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
HOXC8P31273 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC8P31273 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.92■□□□□ 0.78
HOXC8P31273 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXC8P31273 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HOXC8P31273 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC8P31273 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC8P31273 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC8P31273 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXC8P31273 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXC8P31273 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC8P31273 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC8P31273 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
HOXC8P31273 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.92■□□□□ 0.78
HOXC8P31273 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
HOXC8P31273 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXC8P31273 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.92■□□□□ 0.78
HOXC8P31273 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC8P31273 GPALPP1-207ENST00000611650 899 ntBASIC19.92■□□□□ 0.78
HOXC8P31273 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.92■□□□□ 0.78
HOXC8P31273 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.92■□□□□ 0.78
HOXC8P31273 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
HOXC8P31273 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.92■□□□□ 0.78
HOXC8P31273 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC8P31273 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC8P31273 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.92■□□□□ 0.78
HOXC8P31273 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXC8P31273 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.92■□□□□ 0.78
HOXC8P31273 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC8P31273 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC8P31273 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC8P31273 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC8P31273 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.91■□□□□ 0.78
HOXC8P31273 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC8P31273 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC8P31273 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC8P31273 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC8P31273 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.91■□□□□ 0.78
HOXC8P31273 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC8P31273 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.91■□□□□ 0.78
HOXC8P31273 AC073648.2-201ENST00000510116 352 ntBASIC19.91■□□□□ 0.78
HOXC8P31273 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.91■□□□□ 0.78
HOXC8P31273 AC106730.1-201ENST00000566722 1090 ntBASIC19.91■□□□□ 0.78
HOXC8P31273 AC139887.3-201ENST00000568585 713 ntBASIC19.91■□□□□ 0.78
HOXC8P31273 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.91■□□□□ 0.78
HOXC8P31273 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
HOXC8P31273 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.91■□□□□ 0.78
HOXC8P31273 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
HOXC8P31273 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC8P31273 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC8P31273 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC8P31273 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC8P31273 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
HOXC8P31273 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC8P31273 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.91■□□□□ 0.78
HOXC8P31273 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC8P31273 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC8P31273 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.91■□□□□ 0.78
HOXC8P31273 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC8P31273 AC132938.6-201ENST00000623828 1655 ntBASIC19.91■□□□□ 0.78
HOXC8P31273 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC8P31273 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC8P31273 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXC8P31273 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXC8P31273 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXC8P31273 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXC8P31273 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC8P31273 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.9■□□□□ 0.78
HOXC8P31273 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.9■□□□□ 0.78
HOXC8P31273 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.9■□□□□ 0.78
HOXC8P31273 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms