Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 KRT18P1-202ENST00000452408 1331 ntBASIC15.46■□□□□ 0.07
COL8A2P25067 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
COL8A2P25067 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL8A2P25067 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COL8A2P25067 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.46■□□□□ 0.07
COL8A2P25067 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL8A2P25067 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.46■□□□□ 0.07
COL8A2P25067 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL8A2P25067 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
COL8A2P25067 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.46■□□□□ 0.07
COL8A2P25067 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.46■□□□□ 0.07
COL8A2P25067 DUSP5P1-201ENST00000441325 1139 ntBASIC15.46■□□□□ 0.07
COL8A2P25067 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL8A2P25067 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.46■□□□□ 0.07
COL8A2P25067 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.46■□□□□ 0.07
COL8A2P25067 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.46■□□□□ 0.07
COL8A2P25067 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.46■□□□□ 0.07
COL8A2P25067 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL8A2P25067 AC012313.10-201ENST00000623509 926 ntBASIC15.46■□□□□ 0.07
COL8A2P25067 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.46■□□□□ 0.07
COL8A2P25067 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
COL8A2P25067 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COL8A2P25067 AC005332.8-201ENST00000622750 2735 ntBASIC15.46■□□□□ 0.07
COL8A2P25067 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL8A2P25067 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COL8A2P25067 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL8A2P25067 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
COL8A2P25067 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
COL8A2P25067 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
COL8A2P25067 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.46■□□□□ 0.06
COL8A2P25067 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.45■□□□□ 0.06
COL8A2P25067 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COL8A2P25067 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COL8A2P25067 MYLKP1-201ENST00000509077 1580 ntBASIC15.45■□□□□ 0.06
COL8A2P25067 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
COL8A2P25067 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL8A2P25067 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.45■□□□□ 0.06
COL8A2P25067 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL8A2P25067 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.45■□□□□ 0.06
COL8A2P25067 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL8A2P25067 AC112777.1-201ENST00000540175 1423 ntBASIC15.45■□□□□ 0.06
COL8A2P25067 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL8A2P25067 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COL8A2P25067 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.45■□□□□ 0.06
COL8A2P25067 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL8A2P25067 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
COL8A2P25067 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.45■□□□□ 0.06
COL8A2P25067 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL8A2P25067 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.45■□□□□ 0.06
COL8A2P25067 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.45■□□□□ 0.06
COL8A2P25067 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.45■□□□□ 0.06
COL8A2P25067 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
COL8A2P25067 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.45■□□□□ 0.06
COL8A2P25067 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COL8A2P25067 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.45■□□□□ 0.06
COL8A2P25067 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.45■□□□□ 0.06
COL8A2P25067 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.45■□□□□ 0.06
COL8A2P25067 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.45■□□□□ 0.06
COL8A2P25067 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.45■□□□□ 0.06
COL8A2P25067 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.45■□□□□ 0.06
COL8A2P25067 IGHV3-41-201ENST00000613121 348 ntBASIC15.45■□□□□ 0.06
COL8A2P25067 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
COL8A2P25067 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL8A2P25067 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COL8A2P25067 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.45■□□□□ 0.06
COL8A2P25067 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.45■□□□□ 0.06
COL8A2P25067 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL8A2P25067 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL8A2P25067 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL8A2P25067 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.45■□□□□ 0.06
COL8A2P25067 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL8A2P25067 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
COL8A2P25067 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COL8A2P25067 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL8A2P25067 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COL8A2P25067 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL8A2P25067 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
COL8A2P25067 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
COL8A2P25067 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL8A2P25067 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.44■□□□□ 0.06
COL8A2P25067 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL8A2P25067 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.44■□□□□ 0.06
COL8A2P25067 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL8A2P25067 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL8A2P25067 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.44■□□□□ 0.06
COL8A2P25067 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COL8A2P25067 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.44■□□□□ 0.06
COL8A2P25067 MIR149-201ENST00000384879 89 ntBASIC15.44■□□□□ 0.06
COL8A2P25067 IGHGP-201ENST00000390555 1178 ntBASIC15.44■□□□□ 0.06
COL8A2P25067 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COL8A2P25067 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.44■□□□□ 0.06
COL8A2P25067 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.44■□□□□ 0.06
COL8A2P25067 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL8A2P25067 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.44■□□□□ 0.06
COL8A2P25067 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
COL8A2P25067 MIR3652-201ENST00000579335 131 ntBASIC15.44■□□□□ 0.06
COL8A2P25067 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
COL8A2P25067 GPR32P1-201ENST00000601788 811 ntBASIC15.44■□□□□ 0.06
COL8A2P25067 AL390719.2-201ENST00000606993 987 ntBASIC15.44■□□□□ 0.06
COL8A2P25067 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms