Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFSF4P23510 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFSF4P23510 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.68■□□□□ 0.1
TNFSF4P23510 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF4P23510 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFSF4P23510 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFSF4P23510 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFSF4P23510 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TNFSF4P23510 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TNFSF4P23510 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF4P23510 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF4P23510 AL031598.1-201ENST00000561511 1773 ntBASIC15.68■□□□□ 0.1
TNFSF4P23510 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF4P23510 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF4P23510 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF4P23510 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF4P23510 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF4P23510 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF4P23510 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF4P23510 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF4P23510 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.68■□□□□ 0.1
TNFSF4P23510 AC087388.1-201ENST00000571370 1112 ntBASIC15.68■□□□□ 0.1
TNFSF4P23510 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.68■□□□□ 0.1
TNFSF4P23510 AC008687.5-201ENST00000593746 558 ntBASIC15.68■□□□□ 0.1
TNFSF4P23510 AC010331.1-201ENST00000611423 582 ntBASIC15.68■□□□□ 0.1
TNFSF4P23510 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TNFSF4P23510 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF4P23510 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFSF4P23510 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFSF4P23510 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF4P23510 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.68■□□□□ 0.1
TNFSF4P23510 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TNFSF4P23510 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF4P23510 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.68■□□□□ 0.1
TNFSF4P23510 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF4P23510 AL163051.1-201ENST00000569214 1512 ntBASIC15.68■□□□□ 0.1
TNFSF4P23510 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TNFSF4P23510 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
TNFSF4P23510 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF4P23510 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF4P23510 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF4P23510 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.67■□□□□ 0.1
TNFSF4P23510 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TNFSF4P23510 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TNFSF4P23510 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF4P23510 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF4P23510 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFSF4P23510 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF4P23510 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.67■□□□□ 0.1
TNFSF4P23510 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
TNFSF4P23510 MIR149-201ENST00000384879 89 ntBASIC15.67■□□□□ 0.1
TNFSF4P23510 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.67■□□□□ 0.1
TNFSF4P23510 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.67■□□□□ 0.1
TNFSF4P23510 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFSF4P23510 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.67■□□□□ 0.1
TNFSF4P23510 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF4P23510 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
TNFSF4P23510 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFSF4P23510 AL157888.1-201ENST00000631930 593 ntBASIC15.67■□□□□ 0.1
TNFSF4P23510 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF4P23510 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF4P23510 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF4P23510 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
TNFSF4P23510 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFSF4P23510 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF4P23510 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF4P23510 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF4P23510 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFSF4P23510 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFSF4P23510 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFSF4P23510 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF4P23510 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF4P23510 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF4P23510 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF4P23510 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.66■□□□□ 0.1
TNFSF4P23510 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF4P23510 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.66■□□□□ 0.1
TNFSF4P23510 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TNFSF4P23510 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF4P23510 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF4P23510 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.66■□□□□ 0.1
TNFSF4P23510 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF4P23510 AL671277.2-201ENST00000458060 996 ntBASIC15.66■□□□□ 0.1
TNFSF4P23510 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.66■□□□□ 0.1
TNFSF4P23510 NTF6B-201ENST00000591913 560 ntBASIC15.66■□□□□ 0.1
TNFSF4P23510 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.66■□□□□ 0.1
TNFSF4P23510 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.66■□□□□ 0.1
TNFSF4P23510 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF4P23510 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
TNFSF4P23510 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF4P23510 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF4P23510 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF4P23510 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF4P23510 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF4P23510 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.66■□□□□ 0.1
TNFSF4P23510 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF4P23510 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TNFSF4P23510 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TNFSF4P23510 AC009102.3-201ENST00000623118 1491 ntBASIC15.65■□□□□ 0.1
TNFSF4P23510 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms