Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC22.37■■□□□ 1.17
KCNA3P22001 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC22.37■■□□□ 1.17
KCNA3P22001 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC22.37■■□□□ 1.17
KCNA3P22001 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC22.37■■□□□ 1.17
KCNA3P22001 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
KCNA3P22001 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
KCNA3P22001 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
KCNA3P22001 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
KCNA3P22001 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
KCNA3P22001 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC22.37■■□□□ 1.17
KCNA3P22001 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
KCNA3P22001 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC22.37■■□□□ 1.17
KCNA3P22001 ASL-204ENST00000395331 1538 ntTSL 5 BASIC22.36■■□□□ 1.17
KCNA3P22001 SDHAP2-201ENST00000455183 2001 ntBASIC22.36■■□□□ 1.17
KCNA3P22001 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNA3P22001 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
KCNA3P22001 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC22.36■■□□□ 1.17
KCNA3P22001 AC141586.3-201ENST00000562166 1838 ntBASIC22.36■■□□□ 1.17
KCNA3P22001 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
KCNA3P22001 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNA3P22001 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
KCNA3P22001 AC009102.3-201ENST00000623118 1491 ntBASIC22.36■■□□□ 1.17
KCNA3P22001 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
KCNA3P22001 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC22.36■■□□□ 1.17
KCNA3P22001 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC22.36■■□□□ 1.17
KCNA3P22001 MIR770-201ENST00000390219 98 ntBASIC22.36■■□□□ 1.17
KCNA3P22001 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
KCNA3P22001 BX005266.1-201ENST00000473402 457 ntBASIC22.36■■□□□ 1.17
KCNA3P22001 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC22.36■■□□□ 1.17
KCNA3P22001 MSRA-206ENST00000521209 814 ntTSL 3 BASIC22.36■■□□□ 1.17
KCNA3P22001 AP002472.1-201ENST00000577490 586 ntBASIC22.36■■□□□ 1.17
KCNA3P22001 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
KCNA3P22001 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
KCNA3P22001 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC22.36■■□□□ 1.17
KCNA3P22001 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNA3P22001 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNA3P22001 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNA3P22001 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNA3P22001 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
KCNA3P22001 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
KCNA3P22001 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
KCNA3P22001 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC22.36■■□□□ 1.17
KCNA3P22001 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.36■■□□□ 1.17
KCNA3P22001 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNA3P22001 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
KCNA3P22001 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNA3P22001 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.35■■□□□ 1.17
KCNA3P22001 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
KCNA3P22001 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNA3P22001 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNA3P22001 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
KCNA3P22001 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC22.35■■□□□ 1.17
KCNA3P22001 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC22.35■■□□□ 1.17
KCNA3P22001 AC108751.1-201ENST00000490852 363 ntBASIC22.35■■□□□ 1.17
KCNA3P22001 ETFA-208ENST00000559602 792 ntTSL 3 BASIC22.35■■□□□ 1.17
KCNA3P22001 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
KCNA3P22001 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNA3P22001 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
KCNA3P22001 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
KCNA3P22001 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC22.35■■□□□ 1.17
KCNA3P22001 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNA3P22001 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
KCNA3P22001 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNA3P22001 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNA3P22001 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
KCNA3P22001 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNA3P22001 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNA3P22001 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNA3P22001 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNA3P22001 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNA3P22001 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNA3P22001 SYS1-203ENST00000414310 795 ntTSL 3 BASIC22.34■■□□□ 1.17
KCNA3P22001 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC22.34■■□□□ 1.17
KCNA3P22001 CNN2P11-201ENST00000429351 262 ntBASIC22.34■■□□□ 1.17
KCNA3P22001 SRP19-202ENST00000445150 833 ntTSL 2 BASIC22.34■■□□□ 1.17
KCNA3P22001 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC22.34■■□□□ 1.17
KCNA3P22001 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNA3P22001 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
KCNA3P22001 AC079776.2-201ENST00000641154 1609 ntBASIC22.34■■□□□ 1.17
KCNA3P22001 LINC00602-201ENST00000629776 2065 ntBASIC22.34■■□□□ 1.17
KCNA3P22001 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
KCNA3P22001 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC22.33■■□□□ 1.17
KCNA3P22001 AC125437.2-201ENST00000625180 2167 ntBASIC22.33■■□□□ 1.17
KCNA3P22001 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
KCNA3P22001 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
KCNA3P22001 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.17
KCNA3P22001 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC22.33■■□□□ 1.17
KCNA3P22001 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC22.33■■□□□ 1.17
KCNA3P22001 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
KCNA3P22001 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
KCNA3P22001 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
KCNA3P22001 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
KCNA3P22001 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC22.33■■□□□ 1.17
KCNA3P22001 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
KCNA3P22001 C20orf181-201ENST00000623918 480 ntBASIC22.33■■□□□ 1.17
KCNA3P22001 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC22.33■■□□□ 1.17
KCNA3P22001 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
KCNA3P22001 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
KCNA3P22001 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.33■■□□□ 1.16
KCNA3P22001 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms