Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5AP20339 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB5AP20339 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5AP20339 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5AP20339 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RAB5AP20339 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.26□□□□□ -0.13
RAB5AP20339 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5AP20339 BX842568.3-201ENST00000418104 571 ntBASIC14.26□□□□□ -0.13
RAB5AP20339 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB5AP20339 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC14.26□□□□□ -0.13
RAB5AP20339 AC105233.4-201ENST00000642045 216 ntBASIC14.26□□□□□ -0.13
RAB5AP20339 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5AP20339 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RAB5AP20339 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5AP20339 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB5AP20339 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB5AP20339 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5AP20339 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB5AP20339 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5AP20339 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5AP20339 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
RAB5AP20339 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RAB5AP20339 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RAB5AP20339 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5AP20339 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RAB5AP20339 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5AP20339 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB5AP20339 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5AP20339 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5AP20339 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5AP20339 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5AP20339 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RAB5AP20339 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RAB5AP20339 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
RAB5AP20339 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB5AP20339 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5AP20339 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RAB5AP20339 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5AP20339 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5AP20339 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5AP20339 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5AP20339 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB5AP20339 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5AP20339 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
RAB5AP20339 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5AP20339 AC068587.6-202ENST00000641839 5619 ntBASIC14.25□□□□□ -0.13
RAB5AP20339 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5AP20339 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5AP20339 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5AP20339 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RAB5AP20339 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5AP20339 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RAB5AP20339 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5AP20339 MFF-208ENST00000409616 1247 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB5AP20339 AICDA-202ENST00000537228 667 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB5AP20339 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5AP20339 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5AP20339 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RAB5AP20339 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5AP20339 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5AP20339 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RAB5AP20339 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB5AP20339 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RAB5AP20339 AC006116.8-202ENST00000587620 1550 ntBASIC14.25□□□□□ -0.13
RAB5AP20339 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5AP20339 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5AP20339 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5AP20339 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5AP20339 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB5AP20339 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5AP20339 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5AP20339 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB5AP20339 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB5AP20339 AL603756.1-201ENST00000606511 2163 ntBASIC14.24□□□□□ -0.13
RAB5AP20339 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5AP20339 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
RAB5AP20339 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RAB5AP20339 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.24□□□□□ -0.13
RAB5AP20339 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5AP20339 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5AP20339 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5AP20339 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB5AP20339 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5AP20339 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RAB5AP20339 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5AP20339 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB5AP20339 LHPP-203ENST00000392757 840 ntTSL 3 BASIC14.24□□□□□ -0.13
RAB5AP20339 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB5AP20339 AL031963.3-201ENST00000606441 850 ntBASIC14.24□□□□□ -0.13
RAB5AP20339 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB5AP20339 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC14.24□□□□□ -0.13
RAB5AP20339 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB5AP20339 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5AP20339 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5AP20339 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5AP20339 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5AP20339 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5AP20339 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5AP20339 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5AP20339 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms