Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 GMCL1P1-201ENST00000463439 1581 ntBASIC17.04■□□□□ 0.32
TNFRSF1BP20333 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF1BP20333 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TNFRSF1BP20333 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF1BP20333 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF1BP20333 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TNFRSF1BP20333 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.04■□□□□ 0.32
TNFRSF1BP20333 SLC25A1P4-201ENST00000567977 778 ntBASIC17.04■□□□□ 0.32
TNFRSF1BP20333 AL359736.2-201ENST00000621992 437 ntBASIC17.04■□□□□ 0.32
TNFRSF1BP20333 FAM197Y4-202ENST00000622692 608 ntBASIC17.04■□□□□ 0.32
TNFRSF1BP20333 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.04■□□□□ 0.32
TNFRSF1BP20333 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF1BP20333 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF1BP20333 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.04■□□□□ 0.32
TNFRSF1BP20333 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF1BP20333 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF1BP20333 FSCN1P1-201ENST00000568912 1481 ntBASIC17.04■□□□□ 0.32
TNFRSF1BP20333 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF1BP20333 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
TNFRSF1BP20333 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.04■□□□□ 0.32
TNFRSF1BP20333 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
TNFRSF1BP20333 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TNFRSF1BP20333 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.04■□□□□ 0.32
TNFRSF1BP20333 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TNFRSF1BP20333 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.03■□□□□ 0.32
TNFRSF1BP20333 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF1BP20333 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.03■□□□□ 0.32
TNFRSF1BP20333 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TNFRSF1BP20333 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF1BP20333 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.03■□□□□ 0.32
TNFRSF1BP20333 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.03■□□□□ 0.32
TNFRSF1BP20333 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.03■□□□□ 0.32
TNFRSF1BP20333 MFAP1P1-201ENST00000442257 1255 ntBASIC17.03■□□□□ 0.32
TNFRSF1BP20333 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
TNFRSF1BP20333 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.03■□□□□ 0.32
TNFRSF1BP20333 CD177P1-201ENST00000606252 935 ntBASIC17.03■□□□□ 0.32
TNFRSF1BP20333 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF1BP20333 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF1BP20333 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF1BP20333 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF1BP20333 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.03■□□□□ 0.32
TNFRSF1BP20333 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF1BP20333 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF1BP20333 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF1BP20333 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.03■□□□□ 0.32
TNFRSF1BP20333 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TNFRSF1BP20333 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF1BP20333 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF1BP20333 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TNFRSF1BP20333 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TNFRSF1BP20333 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF1BP20333 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TNFRSF1BP20333 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
TNFRSF1BP20333 FLJ13224-201ENST00000313737 1514 ntBASIC17.02■□□□□ 0.32
TNFRSF1BP20333 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF1BP20333 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF1BP20333 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF1BP20333 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF1BP20333 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.02■□□□□ 0.32
TNFRSF1BP20333 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TNFRSF1BP20333 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF1BP20333 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF1BP20333 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TNFRSF1BP20333 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF1BP20333 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.02■□□□□ 0.32
TNFRSF1BP20333 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
TNFRSF1BP20333 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF1BP20333 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF1BP20333 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF1BP20333 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TNFRSF1BP20333 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.02■□□□□ 0.31
TNFRSF1BP20333 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TNFRSF1BP20333 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TNFRSF1BP20333 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TNFRSF1BP20333 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TNFRSF1BP20333 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.01■□□□□ 0.31
TNFRSF1BP20333 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF1BP20333 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF1BP20333 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF1BP20333 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF1BP20333 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF1BP20333 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TNFRSF1BP20333 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
TNFRSF1BP20333 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.01■□□□□ 0.31
TNFRSF1BP20333 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.01■□□□□ 0.31
TNFRSF1BP20333 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.01■□□□□ 0.31
TNFRSF1BP20333 AC034236.2-201ENST00000606662 1610 ntBASIC17.01■□□□□ 0.31
TNFRSF1BP20333 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF1BP20333 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF1BP20333 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF1BP20333 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF1BP20333 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TNFRSF1BP20333 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.01■□□□□ 0.31
TNFRSF1BP20333 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.01■□□□□ 0.31
TNFRSF1BP20333 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.01■□□□□ 0.31
TNFRSF1BP20333 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.01■□□□□ 0.31
TNFRSF1BP20333 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TNFRSF1BP20333 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.01■□□□□ 0.31
TNFRSF1BP20333 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.01■□□□□ 0.31
TNFRSF1BP20333 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms