Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 ESPNP-201ENST00000270691 2015 ntBASIC18.49■□□□□ 0.55
HLA-DPA1P20036 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 GCSHP2-201ENST00000560971 527 ntBASIC18.49■□□□□ 0.55
HLA-DPA1P20036 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 AC093677.2-201ENST00000600169 1863 ntBASIC18.49■□□□□ 0.55
HLA-DPA1P20036 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 ABALON-201ENST00000629058 1903 ntBASIC18.49■□□□□ 0.55
HLA-DPA1P20036 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DPA1P20036 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 AC135776.1-201ENST00000319817 2481 ntBASIC18.48■□□□□ 0.55
HLA-DPA1P20036 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DPA1P20036 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 AC099343.3-201ENST00000605834 2503 ntBASIC18.47■□□□□ 0.55
HLA-DPA1P20036 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DPA1P20036 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DPA1P20036 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms