Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GAP43P17677 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.18■□□□□ 0.82
GAP43P17677 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.18■□□□□ 0.82
GAP43P17677 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GAP43P17677 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.18■□□□□ 0.82
GAP43P17677 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.18■□□□□ 0.82
GAP43P17677 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GAP43P17677 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GAP43P17677 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GAP43P17677 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GAP43P17677 FAM8A6P-201ENST00000407496 1135 ntBASIC20.18■□□□□ 0.82
GAP43P17677 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.18■□□□□ 0.82
GAP43P17677 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GAP43P17677 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.18■□□□□ 0.82
GAP43P17677 DUX4L26-201ENST00000489078 1255 ntBASIC20.18■□□□□ 0.82
GAP43P17677 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GAP43P17677 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GAP43P17677 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.18■□□□□ 0.82
GAP43P17677 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.18■□□□□ 0.82
GAP43P17677 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GAP43P17677 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
GAP43P17677 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GAP43P17677 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
GAP43P17677 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GAP43P17677 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GAP43P17677 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.18■□□□□ 0.82
GAP43P17677 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.18■□□□□ 0.82
GAP43P17677 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GAP43P17677 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.18■□□□□ 0.82
GAP43P17677 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GAP43P17677 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GAP43P17677 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
GAP43P17677 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
GAP43P17677 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
GAP43P17677 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.17■□□□□ 0.82
GAP43P17677 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
GAP43P17677 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.17■□□□□ 0.82
GAP43P17677 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.17■□□□□ 0.82
GAP43P17677 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.17■□□□□ 0.82
GAP43P17677 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
GAP43P17677 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GAP43P17677 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
GAP43P17677 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
GAP43P17677 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.17■□□□□ 0.82
GAP43P17677 HLA-F-220ENST00000434407 884 ntBASIC20.17■□□□□ 0.82
GAP43P17677 KRT18P38-201ENST00000449496 1282 ntBASIC20.17■□□□□ 0.82
GAP43P17677 AL359075.1-203ENST00000462729 1002 ntBASIC20.17■□□□□ 0.82
GAP43P17677 KRT18P21-201ENST00000515767 1272 ntBASIC20.17■□□□□ 0.82
GAP43P17677 AC022616.7-201ENST00000525383 220 ntBASIC20.17■□□□□ 0.82
GAP43P17677 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
GAP43P17677 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.17■□□□□ 0.82
GAP43P17677 LINC01238-205ENST00000567549 1107 ntBASIC20.17■□□□□ 0.82
GAP43P17677 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GAP43P17677 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GAP43P17677 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.17■□□□□ 0.82
GAP43P17677 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.17■□□□□ 0.82
GAP43P17677 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GAP43P17677 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GAP43P17677 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.17■□□□□ 0.82
GAP43P17677 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GAP43P17677 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
GAP43P17677 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GAP43P17677 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
GAP43P17677 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
GAP43P17677 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GAP43P17677 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.17■□□□□ 0.82
GAP43P17677 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
GAP43P17677 AC093010.1-201ENST00000473625 1624 ntBASIC20.16■□□□□ 0.82
GAP43P17677 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
GAP43P17677 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
GAP43P17677 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
GAP43P17677 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
GAP43P17677 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
GAP43P17677 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GAP43P17677 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.16■□□□□ 0.82
GAP43P17677 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.16■□□□□ 0.82
GAP43P17677 AL096828.2-201ENST00000567259 1965 ntBASIC20.16■□□□□ 0.82
GAP43P17677 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
GAP43P17677 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GAP43P17677 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.16■□□□□ 0.82
GAP43P17677 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GAP43P17677 AC024563.2-201ENST00000603282 481 ntBASIC20.16■□□□□ 0.82
GAP43P17677 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
GAP43P17677 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.16■□□□□ 0.82
GAP43P17677 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
GAP43P17677 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GAP43P17677 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
GAP43P17677 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GAP43P17677 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GAP43P17677 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
GAP43P17677 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GAP43P17677 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.15■□□□□ 0.82
GAP43P17677 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GAP43P17677 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GAP43P17677 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GAP43P17677 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.15■□□□□ 0.82
GAP43P17677 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
GAP43P17677 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GAP43P17677 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.15■□□□□ 0.82
GAP43P17677 FAM210CP-201ENST00000445714 574 ntBASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms