Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H1DP16402 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.57■□□□□ 0.08
HIST1H1DP16402 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H1DP16402 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HIST1H1DP16402 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.57■□□□□ 0.08
HIST1H1DP16402 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H1DP16402 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H1DP16402 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H1DP16402 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H1DP16402 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H1DP16402 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H1DP16402 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.56■□□□□ 0.08
HIST1H1DP16402 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.56■□□□□ 0.08
HIST1H1DP16402 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H1DP16402 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H1DP16402 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.56■□□□□ 0.08
HIST1H1DP16402 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H1DP16402 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H1DP16402 AC012313.1-201ENST00000593393 3059 ntBASIC15.56■□□□□ 0.08
HIST1H1DP16402 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H1DP16402 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H1DP16402 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.56■□□□□ 0.08
HIST1H1DP16402 RNA5SP413-201ENST00000516373 109 ntBASIC15.56■□□□□ 0.08
HIST1H1DP16402 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HIST1H1DP16402 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
HIST1H1DP16402 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.56■□□□□ 0.08
HIST1H1DP16402 KRT16P1-201ENST00000399124 1418 ntBASIC15.56■□□□□ 0.08
HIST1H1DP16402 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H1DP16402 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H1DP16402 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H1DP16402 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H1DP16402 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H1DP16402 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H1DP16402 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
HIST1H1DP16402 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
HIST1H1DP16402 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
HIST1H1DP16402 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.56■□□□□ 0.08
HIST1H1DP16402 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H1DP16402 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
HIST1H1DP16402 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
HIST1H1DP16402 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H1DP16402 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H1DP16402 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H1DP16402 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H1DP16402 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.55■□□□□ 0.08
HIST1H1DP16402 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H1DP16402 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H1DP16402 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
HIST1H1DP16402 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
HIST1H1DP16402 AC034236.2-201ENST00000606662 1610 ntBASIC15.55■□□□□ 0.08
HIST1H1DP16402 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H1DP16402 KRT8P50-201ENST00000562022 1438 ntBASIC15.55■□□□□ 0.08
HIST1H1DP16402 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H1DP16402 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H1DP16402 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
HIST1H1DP16402 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.55■□□□□ 0.08
HIST1H1DP16402 FAM207BP-201ENST00000447172 505 ntBASIC15.55■□□□□ 0.08
HIST1H1DP16402 AC008040.2-201ENST00000461049 708 ntBASIC15.55■□□□□ 0.08
HIST1H1DP16402 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.55■□□□□ 0.08
HIST1H1DP16402 AL031985.4-201ENST00000642138 673 ntBASIC15.55■□□□□ 0.08
HIST1H1DP16402 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.55■□□□□ 0.08
HIST1H1DP16402 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H1DP16402 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H1DP16402 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H1DP16402 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.55■□□□□ 0.08
HIST1H1DP16402 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H1DP16402 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.55■□□□□ 0.08
HIST1H1DP16402 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H1DP16402 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H1DP16402 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
HIST1H1DP16402 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H1DP16402 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H1DP16402 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H1DP16402 AC006116.8-202ENST00000587620 1550 ntBASIC15.54■□□□□ 0.08
HIST1H1DP16402 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H1DP16402 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.54■□□□□ 0.08
HIST1H1DP16402 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HIST1H1DP16402 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
HIST1H1DP16402 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H1DP16402 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H1DP16402 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
HIST1H1DP16402 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H1DP16402 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.54■□□□□ 0.08
HIST1H1DP16402 AL353807.1-201ENST00000427475 662 ntBASIC15.54■□□□□ 0.08
HIST1H1DP16402 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.54■□□□□ 0.08
HIST1H1DP16402 MCCD1P1-208ENST00000445732 328 ntBASIC15.54■□□□□ 0.08
HIST1H1DP16402 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H1DP16402 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.54■□□□□ 0.08
HIST1H1DP16402 AC008622.2-201ENST00000617006 1229 ntBASIC15.54■□□□□ 0.08
HIST1H1DP16402 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H1DP16402 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.54■□□□□ 0.08
HIST1H1DP16402 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.54■□□□□ 0.08
HIST1H1DP16402 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H1DP16402 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H1DP16402 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
HIST1H1DP16402 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.54■□□□□ 0.08
HIST1H1DP16402 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.54■□□□□ 0.08
HIST1H1DP16402 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H1DP16402 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HIST1H1DP16402 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms