Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.96■□□□□ 0.3
UBL4AP11441 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.95■□□□□ 0.3
UBL4AP11441 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
UBL4AP11441 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
UBL4AP11441 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBL4AP11441 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBL4AP11441 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.95■□□□□ 0.3
UBL4AP11441 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.95■□□□□ 0.3
UBL4AP11441 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.95■□□□□ 0.3
UBL4AP11441 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.95■□□□□ 0.3
UBL4AP11441 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBL4AP11441 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.95■□□□□ 0.3
UBL4AP11441 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBL4AP11441 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBL4AP11441 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBL4AP11441 AC112497.1-201ENST00000624824 639 ntBASIC16.95■□□□□ 0.3
UBL4AP11441 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
UBL4AP11441 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
UBL4AP11441 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBL4AP11441 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBL4AP11441 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBL4AP11441 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
UBL4AP11441 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBL4AP11441 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBL4AP11441 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBL4AP11441 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBL4AP11441 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBL4AP11441 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBL4AP11441 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.94■□□□□ 0.3
UBL4AP11441 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.94■□□□□ 0.3
UBL4AP11441 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.94■□□□□ 0.3
UBL4AP11441 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBL4AP11441 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
UBL4AP11441 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBL4AP11441 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.94■□□□□ 0.3
UBL4AP11441 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBL4AP11441 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.94■□□□□ 0.3
UBL4AP11441 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBL4AP11441 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBL4AP11441 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBL4AP11441 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBL4AP11441 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBL4AP11441 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBL4AP11441 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.94■□□□□ 0.3
UBL4AP11441 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.94■□□□□ 0.3
UBL4AP11441 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBL4AP11441 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.94■□□□□ 0.3
UBL4AP11441 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBL4AP11441 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBL4AP11441 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.94■□□□□ 0.3
UBL4AP11441 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBL4AP11441 AC046158.3-201ENST00000624947 2558 ntBASIC16.94■□□□□ 0.3
UBL4AP11441 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBL4AP11441 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
UBL4AP11441 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBL4AP11441 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBL4AP11441 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.94■□□□□ 0.3
UBL4AP11441 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
UBL4AP11441 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBL4AP11441 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBL4AP11441 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
UBL4AP11441 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBL4AP11441 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBL4AP11441 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBL4AP11441 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
UBL4AP11441 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBL4AP11441 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBL4AP11441 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.93■□□□□ 0.3
UBL4AP11441 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.93■□□□□ 0.3
UBL4AP11441 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.93■□□□□ 0.3
UBL4AP11441 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.93■□□□□ 0.3
UBL4AP11441 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBL4AP11441 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBL4AP11441 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBL4AP11441 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
UBL4AP11441 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBL4AP11441 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBL4AP11441 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.93■□□□□ 0.3
UBL4AP11441 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
UBL4AP11441 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBL4AP11441 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBL4AP11441 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
UBL4AP11441 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.93■□□□□ 0.3
UBL4AP11441 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.93■□□□□ 0.3
UBL4AP11441 AC009947.2-201ENST00000444014 672 ntBASIC16.93■□□□□ 0.3
UBL4AP11441 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.93■□□□□ 0.3
UBL4AP11441 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.93■□□□□ 0.3
UBL4AP11441 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.93■□□□□ 0.3
UBL4AP11441 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBL4AP11441 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBL4AP11441 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBL4AP11441 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.93■□□□□ 0.3
UBL4AP11441 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBL4AP11441 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
UBL4AP11441 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBL4AP11441 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.93■□□□□ 0.3
UBL4AP11441 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBL4AP11441 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.93■□□□□ 0.3
UBL4AP11441 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.92■□□□□ 0.3
UBL4AP11441 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms