Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPRFP10586 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPRFP10586 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPRFP10586 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.96■□□□□ 0.95
PTPRFP10586 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.96■□□□□ 0.95
PTPRFP10586 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPRFP10586 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.96■□□□□ 0.95
PTPRFP10586 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.96■□□□□ 0.95
PTPRFP10586 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.96■□□□□ 0.95
PTPRFP10586 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.96■□□□□ 0.95
PTPRFP10586 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PTPRFP10586 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPRFP10586 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
PTPRFP10586 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPRFP10586 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPRFP10586 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPRFP10586 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.95■□□□□ 0.94
PTPRFP10586 AC007967.2-201ENST00000432613 625 ntBASIC20.95■□□□□ 0.94
PTPRFP10586 AL591424.1-201ENST00000442569 1213 ntBASIC20.95■□□□□ 0.94
PTPRFP10586 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.95■□□□□ 0.94
PTPRFP10586 AC092910.1-201ENST00000482027 1129 ntBASIC20.95■□□□□ 0.94
PTPRFP10586 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.95■□□□□ 0.94
PTPRFP10586 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPRFP10586 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.95■□□□□ 0.94
PTPRFP10586 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.95■□□□□ 0.94
PTPRFP10586 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPRFP10586 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPRFP10586 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPRFP10586 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPRFP10586 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.95■□□□□ 0.94
PTPRFP10586 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPRFP10586 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
PTPRFP10586 SLC25A24-204ENST00000569674 2357 ntBASIC20.95■□□□□ 0.94
PTPRFP10586 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPRFP10586 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPRFP10586 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.94■□□□□ 0.94
PTPRFP10586 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPRFP10586 AC005082.1-201ENST00000413042 2259 ntBASIC20.94■□□□□ 0.94
PTPRFP10586 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
PTPRFP10586 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.94■□□□□ 0.94
PTPRFP10586 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPRFP10586 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
PTPRFP10586 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPRFP10586 KRT8P47-201ENST00000604727 1398 ntBASIC20.94■□□□□ 0.94
PTPRFP10586 AC027601.4-201ENST00000611259 610 ntBASIC20.94■□□□□ 0.94
PTPRFP10586 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.94■□□□□ 0.94
PTPRFP10586 AL356309.3-201ENST00000624132 1934 ntBASIC20.94■□□□□ 0.94
PTPRFP10586 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPRFP10586 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPRFP10586 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPRFP10586 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPRFP10586 AC079776.2-201ENST00000641154 1609 ntBASIC20.94■□□□□ 0.94
PTPRFP10586 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPRFP10586 ZNF259P1-201ENST00000407656 1365 ntBASIC20.94■□□□□ 0.94
PTPRFP10586 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPRFP10586 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPRFP10586 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPRFP10586 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPRFP10586 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.94■□□□□ 0.94
PTPRFP10586 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.94■□□□□ 0.94
PTPRFP10586 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPRFP10586 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPRFP10586 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.94■□□□□ 0.94
PTPRFP10586 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PTPRFP10586 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PTPRFP10586 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTPRFP10586 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PTPRFP10586 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PTPRFP10586 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PTPRFP10586 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.93■□□□□ 0.94
PTPRFP10586 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTPRFP10586 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTPRFP10586 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.93■□□□□ 0.94
PTPRFP10586 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPRFP10586 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.93■□□□□ 0.94
PTPRFP10586 AL356488.2-201ENST00000602755 427 ntBASIC20.93■□□□□ 0.94
PTPRFP10586 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPRFP10586 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.93■□□□□ 0.94
PTPRFP10586 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTPRFP10586 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPRFP10586 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.93■□□□□ 0.94
PTPRFP10586 AC104109.2-201ENST00000602919 1418 ntBASIC20.93■□□□□ 0.94
PTPRFP10586 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPRFP10586 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.92■□□□□ 0.94
PTPRFP10586 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPRFP10586 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PTPRFP10586 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PTPRFP10586 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PTPRFP10586 RPSAP43-201ENST00000402237 625 ntBASIC20.92■□□□□ 0.94
PTPRFP10586 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.92■□□□□ 0.94
PTPRFP10586 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PTPRFP10586 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
PTPRFP10586 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.92■□□□□ 0.94
PTPRFP10586 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPRFP10586 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPRFP10586 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPRFP10586 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTPRFP10586 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.92■□□□□ 0.94
PTPRFP10586 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PTPRFP10586 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms