Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
UBCP0CG48 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBCP0CG48 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBCP0CG48 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBCP0CG48 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBCP0CG48 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBCP0CG48 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.09■□□□□ 0.17
UBCP0CG48 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBCP0CG48 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
UBCP0CG48 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.08■□□□□ 0.17
UBCP0CG48 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
UBCP0CG48 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
UBCP0CG48 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
UBCP0CG48 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.08■□□□□ 0.16
UBCP0CG48 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
UBCP0CG48 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UBCP0CG48 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBCP0CG48 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.08■□□□□ 0.16
UBCP0CG48 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.08■□□□□ 0.16
UBCP0CG48 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBCP0CG48 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
UBCP0CG48 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.08■□□□□ 0.16
UBCP0CG48 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.08■□□□□ 0.16
UBCP0CG48 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.08■□□□□ 0.16
UBCP0CG48 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.08■□□□□ 0.16
UBCP0CG48 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBCP0CG48 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.08■□□□□ 0.16
UBCP0CG48 AC008622.2-201ENST00000617006 1229 ntBASIC16.08■□□□□ 0.16
UBCP0CG48 FAM197Y4-202ENST00000622692 608 ntBASIC16.08■□□□□ 0.16
UBCP0CG48 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
UBCP0CG48 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.08■□□□□ 0.16
UBCP0CG48 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBCP0CG48 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
UBCP0CG48 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
UBCP0CG48 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.08■□□□□ 0.16
UBCP0CG48 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBCP0CG48 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UBCP0CG48 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBCP0CG48 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
UBCP0CG48 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.08■□□□□ 0.16
UBCP0CG48 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
UBCP0CG48 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBCP0CG48 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBCP0CG48 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBCP0CG48 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBCP0CG48 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBCP0CG48 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBCP0CG48 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UBCP0CG48 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBCP0CG48 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UBCP0CG48 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UBCP0CG48 AC099398.1-201ENST00000567919 2776 ntBASIC16.07■□□□□ 0.16
UBCP0CG48 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
UBCP0CG48 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
UBCP0CG48 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBCP0CG48 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.07■□□□□ 0.16
UBCP0CG48 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
UBCP0CG48 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
UBCP0CG48 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.07■□□□□ 0.16
UBCP0CG48 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UBCP0CG48 MESTP1-201ENST00000404287 994 ntBASIC16.07■□□□□ 0.16
UBCP0CG48 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.07■□□□□ 0.16
UBCP0CG48 CD99P1-205ENST00000527459 561 ntBASIC16.07■□□□□ 0.16
UBCP0CG48 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.07■□□□□ 0.16
UBCP0CG48 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.07■□□□□ 0.16
UBCP0CG48 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
UBCP0CG48 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UBCP0CG48 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
UBCP0CG48 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.07■□□□□ 0.16
UBCP0CG48 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBCP0CG48 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.07■□□□□ 0.16
UBCP0CG48 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
UBCP0CG48 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBCP0CG48 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UBCP0CG48 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBCP0CG48 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBCP0CG48 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UBCP0CG48 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBCP0CG48 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.07■□□□□ 0.16
UBCP0CG48 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBCP0CG48 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBCP0CG48 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UBCP0CG48 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBCP0CG48 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.06■□□□□ 0.16
UBCP0CG48 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UBCP0CG48 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
UBCP0CG48 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.06■□□□□ 0.16
UBCP0CG48 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.06■□□□□ 0.16
UBCP0CG48 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBCP0CG48 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBCP0CG48 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.06■□□□□ 0.16
UBCP0CG48 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBCP0CG48 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
UBCP0CG48 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBCP0CG48 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBCP0CG48 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
UBCP0CG48 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UBCP0CG48 GPAT2P1-201ENST00000444924 1672 ntBASIC16.06■□□□□ 0.16
UBCP0CG48 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UBCP0CG48 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms