Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC172P0C7W6 GMCL1P1-201ENST00000463439 1581 ntBASIC19.82■□□□□ 0.76
CCDC172P0C7W6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC172P0C7W6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CCDC172P0C7W6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC172P0C7W6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC172P0C7W6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC172P0C7W6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 AC018470.1-201ENST00000624790 3129 ntBASIC19.81■□□□□ 0.76
CCDC172P0C7W6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 AP003071.4-201ENST00000562276 1284 ntBASIC19.81■□□□□ 0.76
CCDC172P0C7W6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC172P0C7W6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 MIR4785-201ENST00000585005 73 ntBASIC19.8■□□□□ 0.76
CCDC172P0C7W6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 AC099398.1-201ENST00000567919 2776 ntBASIC19.8■□□□□ 0.76
CCDC172P0C7W6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC172P0C7W6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.79■□□□□ 0.76
CCDC172P0C7W6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC172P0C7W6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC172P0C7W6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC172P0C7W6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC172P0C7W6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC172P0C7W6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC172P0C7W6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC172P0C7W6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC172P0C7W6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC172P0C7W6 HOXB1-202ENST00000577092 1414 ntBASIC19.79■□□□□ 0.76
CCDC172P0C7W6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC172P0C7W6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC172P0C7W6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC172P0C7W6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC172P0C7W6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC172P0C7W6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC172P0C7W6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC172P0C7W6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC172P0C7W6 SLC25A6P5-201ENST00000435663 894 ntBASIC19.79■□□□□ 0.76
CCDC172P0C7W6 CCR12P-201ENST00000446203 998 ntBASIC19.79■□□□□ 0.76
CCDC172P0C7W6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC172P0C7W6 AC009065.1-201ENST00000564055 1225 ntBASIC19.79■□□□□ 0.76
CCDC172P0C7W6 AL353719.1-201ENST00000566847 864 ntBASIC19.79■□□□□ 0.76
CCDC172P0C7W6 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC172P0C7W6 Z99916.2-201ENST00000604037 246 ntBASIC19.79■□□□□ 0.76
CCDC172P0C7W6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC172P0C7W6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC172P0C7W6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC172P0C7W6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms