Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AC093010.1-201ENST00000473625 1624 ntBASIC18.44■□□□□ 0.54
MMP2P08253 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
MMP2P08253 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MMP2P08253 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP2P08253 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.44■□□□□ 0.54
MMP2P08253 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.44■□□□□ 0.54
MMP2P08253 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MMP2P08253 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP2P08253 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MMP2P08253 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP2P08253 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MMP2P08253 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP2P08253 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP2P08253 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MMP2P08253 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.43■□□□□ 0.54
MMP2P08253 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP2P08253 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
MMP2P08253 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP2P08253 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.43■□□□□ 0.54
MMP2P08253 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.43■□□□□ 0.54
MMP2P08253 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP2P08253 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP2P08253 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MMP2P08253 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.43■□□□□ 0.54
MMP2P08253 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MMP2P08253 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.43■□□□□ 0.54
MMP2P08253 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MMP2P08253 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
MMP2P08253 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP2P08253 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.43■□□□□ 0.54
MMP2P08253 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP2P08253 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.43■□□□□ 0.54
MMP2P08253 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
MMP2P08253 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP2P08253 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP2P08253 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
MMP2P08253 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
MMP2P08253 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP2P08253 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP2P08253 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
MMP2P08253 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP2P08253 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP2P08253 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.42■□□□□ 0.54
MMP2P08253 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP2P08253 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP2P08253 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MMP2P08253 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.42■□□□□ 0.54
MMP2P08253 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MMP2P08253 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.42■□□□□ 0.54
MMP2P08253 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.42■□□□□ 0.54
MMP2P08253 VENTXP5-201ENST00000523979 775 ntBASIC18.42■□□□□ 0.54
MMP2P08253 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.42■□□□□ 0.54
MMP2P08253 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.42■□□□□ 0.54
MMP2P08253 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.42■□□□□ 0.54
MMP2P08253 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.42■□□□□ 0.54
MMP2P08253 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP2P08253 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
MMP2P08253 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.42■□□□□ 0.54
MMP2P08253 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
MMP2P08253 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
MMP2P08253 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP2P08253 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
MMP2P08253 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP2P08253 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MMP2P08253 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.41■□□□□ 0.54
MMP2P08253 LINC01311-201ENST00000565162 1445 ntBASIC18.41■□□□□ 0.54
MMP2P08253 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.41■□□□□ 0.54
MMP2P08253 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
MMP2P08253 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.41■□□□□ 0.54
MMP2P08253 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.41■□□□□ 0.54
MMP2P08253 NOC2LP1-202ENST00000452600 2235 ntBASIC18.41■□□□□ 0.54
MMP2P08253 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.41■□□□□ 0.54
MMP2P08253 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
MMP2P08253 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
MMP2P08253 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP2P08253 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP2P08253 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MMP2P08253 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MMP2P08253 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.41■□□□□ 0.54
MMP2P08253 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.41■□□□□ 0.54
MMP2P08253 AL049597.2-201ENST00000565575 961 ntBASIC18.41■□□□□ 0.54
MMP2P08253 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.41■□□□□ 0.54
MMP2P08253 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.41■□□□□ 0.54
MMP2P08253 AC024563.2-201ENST00000603282 481 ntBASIC18.41■□□□□ 0.54
MMP2P08253 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MMP2P08253 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP2P08253 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
MMP2P08253 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MMP2P08253 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP2P08253 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP2P08253 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
MMP2P08253 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MMP2P08253 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.41■□□□□ 0.54
MMP2P08253 AC132938.6-201ENST00000623828 1655 ntBASIC18.41■□□□□ 0.54
MMP2P08253 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MMP2P08253 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.4■□□□□ 0.54
MMP2P08253 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MMP2P08253 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MMP2P08253 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MMP2P08253 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms