Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL1A2P08123 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.03■□□□□ 0.8
COL1A2P08123 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
COL1A2P08123 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL1A2P08123 AC005082.1-201ENST00000413042 2259 ntBASIC20.02■□□□□ 0.8
COL1A2P08123 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL1A2P08123 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.02■□□□□ 0.8
COL1A2P08123 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL1A2P08123 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL1A2P08123 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.02■□□□□ 0.8
COL1A2P08123 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.02■□□□□ 0.8
COL1A2P08123 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
COL1A2P08123 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.02■□□□□ 0.8
COL1A2P08123 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.02■□□□□ 0.8
COL1A2P08123 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
COL1A2P08123 AL138831.2-201ENST00000606564 490 ntBASIC20.02■□□□□ 0.8
COL1A2P08123 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL1A2P08123 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL1A2P08123 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
COL1A2P08123 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL1A2P08123 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.02■□□□□ 0.8
COL1A2P08123 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.02■□□□□ 0.79
COL1A2P08123 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL1A2P08123 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL1A2P08123 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
COL1A2P08123 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.02■□□□□ 0.79
COL1A2P08123 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
COL1A2P08123 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL1A2P08123 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL1A2P08123 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL1A2P08123 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL1A2P08123 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
COL1A2P08123 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL1A2P08123 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL1A2P08123 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL1A2P08123 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.01■□□□□ 0.79
COL1A2P08123 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL1A2P08123 AC073592.3-201ENST00000625118 1834 ntBASIC20.01■□□□□ 0.79
COL1A2P08123 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL1A2P08123 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL1A2P08123 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL1A2P08123 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.01■□□□□ 0.79
COL1A2P08123 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
COL1A2P08123 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.01■□□□□ 0.79
COL1A2P08123 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.01■□□□□ 0.79
COL1A2P08123 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.01■□□□□ 0.79
COL1A2P08123 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
COL1A2P08123 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.01■□□□□ 0.79
COL1A2P08123 AL121912.1-201ENST00000603683 238 ntBASIC20.01■□□□□ 0.79
COL1A2P08123 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.01■□□□□ 0.79
COL1A2P08123 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
COL1A2P08123 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.01■□□□□ 0.79
COL1A2P08123 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.01■□□□□ 0.79
COL1A2P08123 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL1A2P08123 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL1A2P08123 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL1A2P08123 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL1A2P08123 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20■□□□□ 0.79
COL1A2P08123 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
COL1A2P08123 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20■□□□□ 0.79
COL1A2P08123 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL1A2P08123 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20■□□□□ 0.79
COL1A2P08123 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
COL1A2P08123 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL1A2P08123 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL1A2P08123 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL1A2P08123 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL1A2P08123 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20■□□□□ 0.79
COL1A2P08123 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20■□□□□ 0.79
COL1A2P08123 AC009533.2-201ENST00000543664 586 ntBASIC20■□□□□ 0.79
COL1A2P08123 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL1A2P08123 AL591684.3-201ENST00000605187 298 ntBASIC20■□□□□ 0.79
COL1A2P08123 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
COL1A2P08123 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
COL1A2P08123 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL1A2P08123 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL1A2P08123 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
COL1A2P08123 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
COL1A2P08123 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL1A2P08123 AC126763.1-201ENST00000552015 2118 ntBASIC20■□□□□ 0.79
COL1A2P08123 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
COL1A2P08123 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
COL1A2P08123 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL1A2P08123 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL1A2P08123 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL1A2P08123 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
COL1A2P08123 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL1A2P08123 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL1A2P08123 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL1A2P08123 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
COL1A2P08123 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
COL1A2P08123 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.99■□□□□ 0.79
COL1A2P08123 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.99■□□□□ 0.79
COL1A2P08123 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
COL1A2P08123 MIR5100-201ENST00000579544 119 ntBASIC19.99■□□□□ 0.79
COL1A2P08123 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.99■□□□□ 0.79
COL1A2P08123 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL1A2P08123 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL1A2P08123 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL1A2P08123 ESPNP-201ENST00000270691 2015 ntBASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms