Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL5A2P05997 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL5A2P05997 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL5A2P05997 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
COL5A2P05997 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC24.01■■□□□ 1.43
COL5A2P05997 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
COL5A2P05997 AL032819.2-201ENST00000624543 2162 ntBASIC24.01■■□□□ 1.43
COL5A2P05997 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL5A2P05997 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL5A2P05997 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL5A2P05997 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL5A2P05997 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL5A2P05997 AC073621.1-201ENST00000392730 636 ntBASIC24■■□□□ 1.43
COL5A2P05997 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC24■■□□□ 1.43
COL5A2P05997 ALG1L5P-201ENST00000482043 771 ntBASIC24■■□□□ 1.43
COL5A2P05997 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL5A2P05997 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC24■■□□□ 1.43
COL5A2P05997 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC24■■□□□ 1.43
COL5A2P05997 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC24■■□□□ 1.43
COL5A2P05997 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC24■■□□□ 1.43
COL5A2P05997 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC24■■□□□ 1.43
COL5A2P05997 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL5A2P05997 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
COL5A2P05997 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC24■■□□□ 1.43
COL5A2P05997 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC24■■□□□ 1.43
COL5A2P05997 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
COL5A2P05997 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL5A2P05997 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC24■■□□□ 1.43
COL5A2P05997 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC24■■□□□ 1.43
COL5A2P05997 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC24■■□□□ 1.43
COL5A2P05997 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC24■■□□□ 1.43
COL5A2P05997 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC24■■□□□ 1.43
COL5A2P05997 MSRA-206ENST00000521209 814 ntTSL 3 BASIC24■■□□□ 1.43
COL5A2P05997 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
COL5A2P05997 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC24■■□□□ 1.43
COL5A2P05997 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC24■■□□□ 1.43
COL5A2P05997 SDCCAG3P1-201ENST00000589292 1150 ntBASIC24■■□□□ 1.43
COL5A2P05997 AC073592.4-201ENST00000623827 446 ntBASIC24■■□□□ 1.43
COL5A2P05997 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
COL5A2P05997 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC23.99■■□□□ 1.43
COL5A2P05997 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL5A2P05997 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC23.99■■□□□ 1.43
COL5A2P05997 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
COL5A2P05997 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC23.99■■□□□ 1.43
COL5A2P05997 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL5A2P05997 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL5A2P05997 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
COL5A2P05997 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL5A2P05997 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL5A2P05997 LBH-203ENST00000404397 543 ntTSL 4 BASIC23.99■■□□□ 1.43
COL5A2P05997 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC23.99■■□□□ 1.43
COL5A2P05997 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC23.99■■□□□ 1.43
COL5A2P05997 YBX1P5-201ENST00000509441 847 ntBASIC23.99■■□□□ 1.43
COL5A2P05997 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC23.99■■□□□ 1.43
COL5A2P05997 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
COL5A2P05997 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC23.99■■□□□ 1.43
COL5A2P05997 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC23.99■■□□□ 1.43
COL5A2P05997 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.99■■□□□ 1.43
COL5A2P05997 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL5A2P05997 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COL5A2P05997 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COL5A2P05997 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL5A2P05997 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.98■■□□□ 1.43
COL5A2P05997 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
COL5A2P05997 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC23.98■■□□□ 1.43
COL5A2P05997 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.98■■□□□ 1.43
COL5A2P05997 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL5A2P05997 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
COL5A2P05997 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL5A2P05997 AC211486.1-202ENST00000416371 468 ntBASIC23.98■■□□□ 1.43
COL5A2P05997 METTL21AP1-201ENST00000438852 635 ntBASIC23.98■■□□□ 1.43
COL5A2P05997 BX005266.1-201ENST00000473402 457 ntBASIC23.98■■□□□ 1.43
COL5A2P05997 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC23.98■■□□□ 1.43
COL5A2P05997 AC211476.1-201ENST00000503899 468 ntBASIC23.98■■□□□ 1.43
COL5A2P05997 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC23.98■■□□□ 1.43
COL5A2P05997 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL5A2P05997 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL5A2P05997 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL5A2P05997 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC23.97■■□□□ 1.43
COL5A2P05997 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL5A2P05997 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL5A2P05997 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL5A2P05997 ME2-218ENST00000640965 2476 ntTSL 5 BASIC23.97■■□□□ 1.43
COL5A2P05997 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC23.97■■□□□ 1.43
COL5A2P05997 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL5A2P05997 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL5A2P05997 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL5A2P05997 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL5A2P05997 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL5A2P05997 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC23.97■■□□□ 1.43
COL5A2P05997 AC007967.3-201ENST00000434308 558 ntBASIC23.97■■□□□ 1.43
COL5A2P05997 SRP19-202ENST00000445150 833 ntTSL 2 BASIC23.97■■□□□ 1.43
COL5A2P05997 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC23.97■■□□□ 1.43
COL5A2P05997 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC23.97■■□□□ 1.43
COL5A2P05997 RPS15-207ENST00000591032 550 ntTSL 3 BASIC23.97■■□□□ 1.43
COL5A2P05997 MTDHP5-201ENST00000598980 586 ntBASIC23.97■■□□□ 1.43
COL5A2P05997 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC23.97■■□□□ 1.43
COL5A2P05997 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL5A2P05997 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC23.97■■□□□ 1.43
COL5A2P05997 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms