Protein–RNA interactions for Protein: P05204

HMGN2, Non-histone chromosomal protein HMG-17, humanhuman

Known RBP Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P05204 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGN2P05204 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGN2P05204 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.13■□□□□ 0.33
HMGN2P05204 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGN2P05204 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN2P05204 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN2P05204 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HMGN2P05204 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN2P05204 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN2P05204 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN2P05204 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HMGN2P05204 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN2P05204 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
HMGN2P05204 AL096828.2-201ENST00000567259 1965 ntBASIC17.12■□□□□ 0.33
HMGN2P05204 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN2P05204 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN2P05204 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGN2P05204 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN2P05204 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN2P05204 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN2P05204 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HMGN2P05204 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN2P05204 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN2P05204 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN2P05204 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN2P05204 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN2P05204 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.12■□□□□ 0.33
HMGN2P05204 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGN2P05204 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.12■□□□□ 0.33
HMGN2P05204 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGN2P05204 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN2P05204 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN2P05204 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN2P05204 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN2P05204 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGN2P05204 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGN2P05204 AC068880.1-201ENST00000507289 2297 ntBASIC17.12■□□□□ 0.33
HMGN2P05204 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN2P05204 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN2P05204 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN2P05204 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.11■□□□□ 0.33
HMGN2P05204 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HMGN2P05204 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN2P05204 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN2P05204 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN2P05204 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN2P05204 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HMGN2P05204 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN2P05204 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN2P05204 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN2P05204 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN2P05204 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
HMGN2P05204 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.11■□□□□ 0.33
HMGN2P05204 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.11■□□□□ 0.33
HMGN2P05204 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.11■□□□□ 0.33
HMGN2P05204 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.11■□□□□ 0.33
HMGN2P05204 MIR3180-4-201ENST00000582223 153 ntBASIC17.11■□□□□ 0.33
HMGN2P05204 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.11■□□□□ 0.33
HMGN2P05204 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.11■□□□□ 0.33
HMGN2P05204 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.11■□□□□ 0.33
HMGN2P05204 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN2P05204 AC138028.4-201ENST00000564984 1845 ntBASIC17.11■□□□□ 0.33
HMGN2P05204 KRT18P22-201ENST00000402024 1347 ntBASIC17.11■□□□□ 0.33
HMGN2P05204 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.11■□□□□ 0.33
HMGN2P05204 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN2P05204 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN2P05204 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN2P05204 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN2P05204 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HMGN2P05204 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN2P05204 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.11■□□□□ 0.33
HMGN2P05204 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGN2P05204 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN2P05204 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.1■□□□□ 0.33
HMGN2P05204 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN2P05204 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN2P05204 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN2P05204 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.1■□□□□ 0.33
HMGN2P05204 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN2P05204 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
HMGN2P05204 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN2P05204 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN2P05204 AC087499.1-201ENST00000418141 1075 ntBASIC17.1■□□□□ 0.33
HMGN2P05204 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN2P05204 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN2P05204 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.1■□□□□ 0.33
HMGN2P05204 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.1■□□□□ 0.33
HMGN2P05204 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.1■□□□□ 0.33
HMGN2P05204 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.1■□□□□ 0.33
HMGN2P05204 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN2P05204 AC010240.3-201ENST00000607688 395 ntBASIC17.1■□□□□ 0.33
HMGN2P05204 AC024243.1-201ENST00000609234 778 ntBASIC17.1■□□□□ 0.33
HMGN2P05204 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HMGN2P05204 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN2P05204 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGN2P05204 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.1■□□□□ 0.33
HMGN2P05204 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
HMGN2P05204 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
HMGN2P05204 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.1■□□□□ 0.33
HMGN2P05204 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms