Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.3■□□□□ 0.36
MT-ND1P03886 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND1P03886 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND1P03886 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.3■□□□□ 0.36
MT-ND1P03886 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.3■□□□□ 0.36
MT-ND1P03886 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
MT-ND1P03886 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.3■□□□□ 0.36
MT-ND1P03886 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND1P03886 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND1P03886 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
MT-ND1P03886 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
MT-ND1P03886 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
MT-ND1P03886 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.3■□□□□ 0.36
MT-ND1P03886 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND1P03886 AL023875.1-201ENST00000640777 796 ntBASIC17.3■□□□□ 0.36
MT-ND1P03886 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND1P03886 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND1P03886 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
MT-ND1P03886 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND1P03886 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND1P03886 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.3■□□□□ 0.36
MT-ND1P03886 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
MT-ND1P03886 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.3■□□□□ 0.36
MT-ND1P03886 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND1P03886 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MT-ND1P03886 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
MT-ND1P03886 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND1P03886 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND1P03886 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND1P03886 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND1P03886 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
MT-ND1P03886 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
MT-ND1P03886 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
MT-ND1P03886 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MT-ND1P03886 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND1P03886 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND1P03886 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND1P03886 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND1P03886 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.29■□□□□ 0.36
MT-ND1P03886 AC239809.2-201ENST00000415381 517 ntBASIC17.29■□□□□ 0.36
MT-ND1P03886 POU5F1P3-201ENST00000428824 1078 ntBASIC17.29■□□□□ 0.36
MT-ND1P03886 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND1P03886 SLC25A6P5-201ENST00000435663 894 ntBASIC17.29■□□□□ 0.36
MT-ND1P03886 KRT16P5-201ENST00000455284 522 ntBASIC17.29■□□□□ 0.36
MT-ND1P03886 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND1P03886 Z85996.1-201ENST00000494644 937 ntBASIC17.29■□□□□ 0.36
MT-ND1P03886 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.29■□□□□ 0.36
MT-ND1P03886 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND1P03886 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND1P03886 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.29■□□□□ 0.36
MT-ND1P03886 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
MT-ND1P03886 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND1P03886 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND1P03886 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND1P03886 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND1P03886 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.29■□□□□ 0.36
MT-ND1P03886 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
MT-ND1P03886 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND1P03886 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
MT-ND1P03886 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND1P03886 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND1P03886 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND1P03886 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
MT-ND1P03886 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND1P03886 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND1P03886 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MT-ND1P03886 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
MT-ND1P03886 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND1P03886 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MT-ND1P03886 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MT-ND1P03886 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.28■□□□□ 0.36
MT-ND1P03886 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.28■□□□□ 0.36
MT-ND1P03886 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.28■□□□□ 0.36
MT-ND1P03886 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND1P03886 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND1P03886 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MT-ND1P03886 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND1P03886 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND1P03886 KRASP1-201ENST00000407852 552 ntBASIC17.28■□□□□ 0.36
MT-ND1P03886 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.28■□□□□ 0.36
MT-ND1P03886 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.28■□□□□ 0.36
MT-ND1P03886 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.28■□□□□ 0.36
MT-ND1P03886 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
MT-ND1P03886 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND1P03886 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.28■□□□□ 0.36
MT-ND1P03886 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.28■□□□□ 0.36
MT-ND1P03886 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND1P03886 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND1P03886 AC141586.5-201ENST00000624546 2050 ntBASIC17.28■□□□□ 0.36
MT-ND1P03886 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.28■□□□□ 0.36
MT-ND1P03886 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND1P03886 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.28■□□□□ 0.36
MT-ND1P03886 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.28■□□□□ 0.36
MT-ND1P03886 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND1P03886 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND1P03886 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND1P03886 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-ND1P03886 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MT-ND1P03886 SIRPAP1-201ENST00000448467 1770 ntBASIC17.28■□□□□ 0.36
MT-ND1P03886 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms