Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.83■□□□□ 0.93
ALDH1A1P00352 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.83■□□□□ 0.93
ALDH1A1P00352 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.83■□□□□ 0.93
ALDH1A1P00352 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC20.83■□□□□ 0.93
ALDH1A1P00352 CLDN5-201ENST00000403084 2357 ntBASIC20.83■□□□□ 0.93
ALDH1A1P00352 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
ALDH1A1P00352 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ALDH1A1P00352 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ALDH1A1P00352 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ALDH1A1P00352 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.83■□□□□ 0.92
ALDH1A1P00352 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ALDH1A1P00352 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ALDH1A1P00352 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ALDH1A1P00352 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ALDH1A1P00352 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ALDH1A1P00352 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
ALDH1A1P00352 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ALDH1A1P00352 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.82■□□□□ 0.92
ALDH1A1P00352 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ALDH1A1P00352 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ALDH1A1P00352 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ALDH1A1P00352 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.82■□□□□ 0.92
ALDH1A1P00352 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ALDH1A1P00352 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.82■□□□□ 0.92
ALDH1A1P00352 MKNK2P1-201ENST00000437526 628 ntBASIC20.82■□□□□ 0.92
ALDH1A1P00352 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ALDH1A1P00352 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.82■□□□□ 0.92
ALDH1A1P00352 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ALDH1A1P00352 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.82■□□□□ 0.92
ALDH1A1P00352 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.82■□□□□ 0.92
ALDH1A1P00352 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
ALDH1A1P00352 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ALDH1A1P00352 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ALDH1A1P00352 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.82■□□□□ 0.92
ALDH1A1P00352 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ALDH1A1P00352 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ALDH1A1P00352 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ALDH1A1P00352 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ALDH1A1P00352 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ALDH1A1P00352 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ALDH1A1P00352 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.81■□□□□ 0.92
ALDH1A1P00352 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.81■□□□□ 0.92
ALDH1A1P00352 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ALDH1A1P00352 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ALDH1A1P00352 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ALDH1A1P00352 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.81■□□□□ 0.92
ALDH1A1P00352 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.81■□□□□ 0.92
ALDH1A1P00352 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.81■□□□□ 0.92
ALDH1A1P00352 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.81■□□□□ 0.92
ALDH1A1P00352 KRT18P65-201ENST00000439811 1286 ntBASIC20.81■□□□□ 0.92
ALDH1A1P00352 KRT18P2-201ENST00000447938 1258 ntBASIC20.81■□□□□ 0.92
ALDH1A1P00352 ALG1L5P-201ENST00000482043 771 ntBASIC20.81■□□□□ 0.92
ALDH1A1P00352 AC136632.2-201ENST00000512891 861 ntBASIC20.81■□□□□ 0.92
ALDH1A1P00352 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.81■□□□□ 0.92
ALDH1A1P00352 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.81■□□□□ 0.92
ALDH1A1P00352 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC20.81■□□□□ 0.92
ALDH1A1P00352 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.81■□□□□ 0.92
ALDH1A1P00352 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ALDH1A1P00352 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.81■□□□□ 0.92
ALDH1A1P00352 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ALDH1A1P00352 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ALDH1A1P00352 AC079776.2-201ENST00000641154 1609 ntBASIC20.81■□□□□ 0.92
ALDH1A1P00352 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.81■□□□□ 0.92
ALDH1A1P00352 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ALDH1A1P00352 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALDH1A1P00352 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ALDH1A1P00352 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ALDH1A1P00352 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.8■□□□□ 0.92
ALDH1A1P00352 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALDH1A1P00352 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALDH1A1P00352 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.8■□□□□ 0.92
ALDH1A1P00352 AC073621.1-201ENST00000392730 636 ntBASIC20.8■□□□□ 0.92
ALDH1A1P00352 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.8■□□□□ 0.92
ALDH1A1P00352 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.8■□□□□ 0.92
ALDH1A1P00352 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ALDH1A1P00352 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ALDH1A1P00352 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.8■□□□□ 0.92
ALDH1A1P00352 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ALDH1A1P00352 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ALDH1A1P00352 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.8■□□□□ 0.92
ALDH1A1P00352 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ALDH1A1P00352 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A1P00352 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ALDH1A1P00352 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A1P00352 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
ALDH1A1P00352 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ALDH1A1P00352 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A1P00352 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A1P00352 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A1P00352 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.79■□□□□ 0.92
ALDH1A1P00352 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A1P00352 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A1P00352 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A1P00352 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A1P00352 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A1P00352 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A1P00352 COX20P2-201ENST00000452636 358 ntBASIC20.79■□□□□ 0.92
ALDH1A1P00352 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.79■□□□□ 0.92
ALDH1A1P00352 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A1P00352 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms