Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KDM4BO94953 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.12■□□□□ 0.17
KDM4BO94953 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KDM4BO94953 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KDM4BO94953 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KDM4BO94953 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KDM4BO94953 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.11■□□□□ 0.17
KDM4BO94953 AC135776.1-201ENST00000319817 2481 ntBASIC16.11■□□□□ 0.17
KDM4BO94953 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KDM4BO94953 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KDM4BO94953 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.11■□□□□ 0.17
KDM4BO94953 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KDM4BO94953 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KDM4BO94953 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.11■□□□□ 0.17
KDM4BO94953 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.11■□□□□ 0.17
KDM4BO94953 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
KDM4BO94953 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KDM4BO94953 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KDM4BO94953 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.11■□□□□ 0.17
KDM4BO94953 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.11■□□□□ 0.17
KDM4BO94953 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.11■□□□□ 0.17
KDM4BO94953 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.11■□□□□ 0.17
KDM4BO94953 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.11■□□□□ 0.17
KDM4BO94953 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.11■□□□□ 0.17
KDM4BO94953 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.11■□□□□ 0.17
KDM4BO94953 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.11■□□□□ 0.17
KDM4BO94953 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KDM4BO94953 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.11■□□□□ 0.17
KDM4BO94953 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KDM4BO94953 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
KDM4BO94953 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KDM4BO94953 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KDM4BO94953 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KDM4BO94953 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KDM4BO94953 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KDM4BO94953 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KDM4BO94953 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDM4BO94953 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDM4BO94953 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.1■□□□□ 0.17
KDM4BO94953 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KDM4BO94953 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDM4BO94953 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
KDM4BO94953 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
KDM4BO94953 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KDM4BO94953 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KDM4BO94953 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.1■□□□□ 0.17
KDM4BO94953 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
KDM4BO94953 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDM4BO94953 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDM4BO94953 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.1■□□□□ 0.17
KDM4BO94953 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDM4BO94953 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDM4BO94953 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.1■□□□□ 0.17
KDM4BO94953 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KDM4BO94953 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
KDM4BO94953 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.1■□□□□ 0.17
KDM4BO94953 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.1■□□□□ 0.17
KDM4BO94953 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.1■□□□□ 0.17
KDM4BO94953 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDM4BO94953 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KDM4BO94953 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDM4BO94953 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.1■□□□□ 0.17
KDM4BO94953 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.1■□□□□ 0.17
KDM4BO94953 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
KDM4BO94953 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.1■□□□□ 0.17
KDM4BO94953 AC073648.6-201ENST00000641589 218 ntBASIC16.1■□□□□ 0.17
KDM4BO94953 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDM4BO94953 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.1■□□□□ 0.17
KDM4BO94953 HEIH-201ENST00000623091 1652 ntBASIC16.1■□□□□ 0.17
KDM4BO94953 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDM4BO94953 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDM4BO94953 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KDM4BO94953 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.1■□□□□ 0.17
KDM4BO94953 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDM4BO94953 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDM4BO94953 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
KDM4BO94953 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.1■□□□□ 0.17
KDM4BO94953 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
KDM4BO94953 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.09■□□□□ 0.17
KDM4BO94953 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KDM4BO94953 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
KDM4BO94953 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KDM4BO94953 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KDM4BO94953 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
KDM4BO94953 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
KDM4BO94953 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KDM4BO94953 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
KDM4BO94953 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
KDM4BO94953 AC134043.2-201ENST00000624206 2238 ntBASIC16.09■□□□□ 0.17
KDM4BO94953 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KDM4BO94953 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KDM4BO94953 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KDM4BO94953 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KDM4BO94953 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KDM4BO94953 POU5F1P3-201ENST00000428824 1078 ntBASIC16.09■□□□□ 0.17
KDM4BO94953 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.09■□□□□ 0.17
KDM4BO94953 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.09■□□□□ 0.17
KDM4BO94953 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
KDM4BO94953 AC124067.4-201ENST00000519691 2379 ntBASIC16.09■□□□□ 0.17
KDM4BO94953 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms