Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC24.2■■□□□ 1.46
LTN1O94822 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC24.2■■□□□ 1.46
LTN1O94822 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
LTN1O94822 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
LTN1O94822 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
LTN1O94822 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
LTN1O94822 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
LTN1O94822 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
LTN1O94822 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC24.2■■□□□ 1.46
LTN1O94822 SNCG-201ENST00000348795 684 ntTSL 2 BASIC24.19■■□□□ 1.46
LTN1O94822 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
LTN1O94822 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC24.19■■□□□ 1.46
LTN1O94822 LINC00602-201ENST00000629776 2065 ntBASIC24.19■■□□□ 1.46
LTN1O94822 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
LTN1O94822 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
LTN1O94822 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC24.19■■□□□ 1.46
LTN1O94822 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
LTN1O94822 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
LTN1O94822 CTNS-203ENST00000399306 803 ntTSL 3 BASIC24.19■■□□□ 1.46
LTN1O94822 MIR1233-2-201ENST00000408138 82 ntBASIC24.19■■□□□ 1.46
LTN1O94822 MIR1233-1-201ENST00000408722 82 ntBASIC24.19■■□□□ 1.46
LTN1O94822 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
LTN1O94822 BX842568.4-201ENST00000421222 227 ntBASIC24.19■■□□□ 1.46
LTN1O94822 AC007967.3-201ENST00000434308 558 ntBASIC24.19■■□□□ 1.46
LTN1O94822 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
LTN1O94822 AC093909.1-201ENST00000504731 1122 ntBASIC24.19■■□□□ 1.46
LTN1O94822 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC24.19■■□□□ 1.46
LTN1O94822 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC24.19■■□□□ 1.46
LTN1O94822 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC24.19■■□□□ 1.46
LTN1O94822 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC24.19■■□□□ 1.46
LTN1O94822 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC24.18■■□□□ 1.46
LTN1O94822 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LTN1O94822 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
LTN1O94822 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
LTN1O94822 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LTN1O94822 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LTN1O94822 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC24.18■■□□□ 1.46
LTN1O94822 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
LTN1O94822 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC24.18■■□□□ 1.46
LTN1O94822 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
LTN1O94822 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC24.18■■□□□ 1.46
LTN1O94822 FAM215A-202ENST00000632077 792 ntBASIC24.18■■□□□ 1.46
LTN1O94822 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LTN1O94822 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC24.17■■□□□ 1.46
LTN1O94822 AC132938.6-201ENST00000623828 1655 ntBASIC24.17■■□□□ 1.46
LTN1O94822 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
LTN1O94822 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LTN1O94822 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LTN1O94822 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LTN1O94822 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC24.17■■□□□ 1.46
LTN1O94822 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC24.17■■□□□ 1.46
LTN1O94822 AC116407.3-201ENST00000623905 1129 ntBASIC24.17■■□□□ 1.46
LTN1O94822 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LTN1O94822 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LTN1O94822 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
LTN1O94822 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LTN1O94822 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
LTN1O94822 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC24.16■■□□□ 1.46
LTN1O94822 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LTN1O94822 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
LTN1O94822 RPS29-206ENST00000557111 488 ntTSL 2 BASIC24.16■■□□□ 1.46
LTN1O94822 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC24.16■■□□□ 1.46
LTN1O94822 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC24.16■■□□□ 1.46
LTN1O94822 MTDHP4-201ENST00000600287 670 ntBASIC24.16■■□□□ 1.46
LTN1O94822 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LTN1O94822 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC24.16■■□□□ 1.46
LTN1O94822 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC24.16■■□□□ 1.46
LTN1O94822 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
LTN1O94822 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
LTN1O94822 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC24.16■■□□□ 1.46
LTN1O94822 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC24.16■■□□□ 1.46
LTN1O94822 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC24.16■■□□□ 1.46
LTN1O94822 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
LTN1O94822 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC24.16■■□□□ 1.46
LTN1O94822 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
LTN1O94822 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
LTN1O94822 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
LTN1O94822 CD63-204ENST00000546939 779 ntTSL 3 BASIC24.16■■□□□ 1.46
LTN1O94822 Z83851.2-201ENST00000609564 659 ntBASIC24.16■■□□□ 1.46
LTN1O94822 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC24.16■■□□□ 1.46
LTN1O94822 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC24.16■■□□□ 1.46
LTN1O94822 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
LTN1O94822 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC24.16■■□□□ 1.46
LTN1O94822 AC010460.3-201ENST00000511359 1579 ntBASIC24.16■■□□□ 1.46
LTN1O94822 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC24.15■■□□□ 1.46
LTN1O94822 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC24.15■■□□□ 1.46
LTN1O94822 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
LTN1O94822 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
LTN1O94822 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC24.15■■□□□ 1.46
LTN1O94822 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
LTN1O94822 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC24.15■■□□□ 1.46
LTN1O94822 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC24.15■■□□□ 1.46
LTN1O94822 AC116562.4-201ENST00000641316 2276 ntBASIC24.15■■□□□ 1.46
LTN1O94822 AC092910.1-201ENST00000482027 1129 ntBASIC24.15■■□□□ 1.46
LTN1O94822 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC24.15■■□□□ 1.46
LTN1O94822 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC24.15■■□□□ 1.46
LTN1O94822 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
LTN1O94822 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
LTN1O94822 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
LTN1O94822 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms