Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KLHL41O60662 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
KLHL41O60662 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KLHL41O60662 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
KLHL41O60662 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.2■□□□□ 0.5
KLHL41O60662 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
KLHL41O60662 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KLHL41O60662 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
KLHL41O60662 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
KLHL41O60662 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.2■□□□□ 0.5
KLHL41O60662 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KLHL41O60662 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KLHL41O60662 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.2■□□□□ 0.5
KLHL41O60662 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.2■□□□□ 0.5
KLHL41O60662 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.2■□□□□ 0.5
KLHL41O60662 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KLHL41O60662 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.2■□□□□ 0.5
KLHL41O60662 AL049597.2-201ENST00000565575 961 ntBASIC18.2■□□□□ 0.5
KLHL41O60662 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
KLHL41O60662 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.2■□□□□ 0.5
KLHL41O60662 AC131212.4-201ENST00000623606 975 ntBASIC18.2■□□□□ 0.5
KLHL41O60662 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KLHL41O60662 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KLHL41O60662 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KLHL41O60662 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KLHL41O60662 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KLHL41O60662 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KLHL41O60662 LINC00896-202ENST00000609602 2128 ntBASIC18.2■□□□□ 0.5
KLHL41O60662 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
KLHL41O60662 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
KLHL41O60662 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
KLHL41O60662 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
KLHL41O60662 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL41O60662 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL41O60662 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL41O60662 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
KLHL41O60662 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL41O60662 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
KLHL41O60662 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.19■□□□□ 0.5
KLHL41O60662 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL41O60662 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.19■□□□□ 0.5
KLHL41O60662 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL41O60662 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL41O60662 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL41O60662 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL41O60662 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
KLHL41O60662 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.19■□□□□ 0.5
KLHL41O60662 AC113347.1-201ENST00000413321 391 ntBASIC18.19■□□□□ 0.5
KLHL41O60662 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL41O60662 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.19■□□□□ 0.5
KLHL41O60662 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL41O60662 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL41O60662 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL41O60662 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL41O60662 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL41O60662 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL41O60662 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.19■□□□□ 0.5
KLHL41O60662 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL41O60662 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL41O60662 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
KLHL41O60662 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.19■□□□□ 0.5
KLHL41O60662 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL41O60662 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KLHL41O60662 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.18■□□□□ 0.5
KLHL41O60662 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL41O60662 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL41O60662 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.18■□□□□ 0.5
KLHL41O60662 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL41O60662 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.18■□□□□ 0.5
KLHL41O60662 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL41O60662 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL41O60662 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL41O60662 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL41O60662 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL41O60662 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.18■□□□□ 0.5
KLHL41O60662 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.18■□□□□ 0.5
KLHL41O60662 AL137013.1-201ENST00000432946 1228 ntBASIC18.18■□□□□ 0.5
KLHL41O60662 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.18■□□□□ 0.5
KLHL41O60662 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
KLHL41O60662 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.18■□□□□ 0.5
KLHL41O60662 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.18■□□□□ 0.5
KLHL41O60662 AC128688.1-201ENST00000487626 519 ntBASIC18.18■□□□□ 0.5
KLHL41O60662 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.18■□□□□ 0.5
KLHL41O60662 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.18■□□□□ 0.5
KLHL41O60662 HLA-A-209ENST00000638375 975 ntBASIC18.18■□□□□ 0.5
KLHL41O60662 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
KLHL41O60662 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.18■□□□□ 0.5
KLHL41O60662 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.18■□□□□ 0.5
KLHL41O60662 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
KLHL41O60662 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
KLHL41O60662 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
KLHL41O60662 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KLHL41O60662 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.17■□□□□ 0.5
KLHL41O60662 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
KLHL41O60662 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KLHL41O60662 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
KLHL41O60662 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
KLHL41O60662 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
KLHL41O60662 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.17■□□□□ 0.5
KLHL41O60662 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms