Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.46■□□□□ 0.23
ZIC3O60481 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.46■□□□□ 0.23
ZIC3O60481 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.46■□□□□ 0.23
ZIC3O60481 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ZIC3O60481 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZIC3O60481 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZIC3O60481 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ZIC3O60481 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.46■□□□□ 0.23
ZIC3O60481 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.46■□□□□ 0.23
ZIC3O60481 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.46■□□□□ 0.22
ZIC3O60481 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.45■□□□□ 0.22
ZIC3O60481 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.45■□□□□ 0.22
ZIC3O60481 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.45■□□□□ 0.22
ZIC3O60481 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZIC3O60481 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
ZIC3O60481 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ZIC3O60481 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
ZIC3O60481 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ZIC3O60481 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZIC3O60481 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZIC3O60481 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.45■□□□□ 0.22
ZIC3O60481 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZIC3O60481 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
ZIC3O60481 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ZIC3O60481 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZIC3O60481 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZIC3O60481 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.45■□□□□ 0.22
ZIC3O60481 NPAP1P7-201ENST00000613027 823 ntBASIC16.45■□□□□ 0.22
ZIC3O60481 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.45■□□□□ 0.22
ZIC3O60481 AC093458.2-201ENST00000623150 629 ntBASIC16.45■□□□□ 0.22
ZIC3O60481 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZIC3O60481 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZIC3O60481 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZIC3O60481 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZIC3O60481 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZIC3O60481 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZIC3O60481 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZIC3O60481 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZIC3O60481 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZIC3O60481 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZIC3O60481 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ZIC3O60481 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZIC3O60481 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
ZIC3O60481 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.44■□□□□ 0.22
ZIC3O60481 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZIC3O60481 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZIC3O60481 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZIC3O60481 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZIC3O60481 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZIC3O60481 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZIC3O60481 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.44■□□□□ 0.22
ZIC3O60481 CHCHD2P8-201ENST00000429873 447 ntBASIC16.44■□□□□ 0.22
ZIC3O60481 ATP5G2P1-201ENST00000433580 426 ntBASIC16.44■□□□□ 0.22
ZIC3O60481 AP002383.4-201ENST00000442518 975 ntBASIC16.44■□□□□ 0.22
ZIC3O60481 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZIC3O60481 AC090164.3-201ENST00000610780 2143 ntBASIC16.44■□□□□ 0.22
ZIC3O60481 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.44■□□□□ 0.22
ZIC3O60481 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.44■□□□□ 0.22
ZIC3O60481 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZIC3O60481 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ZIC3O60481 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZIC3O60481 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZIC3O60481 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.44■□□□□ 0.22
ZIC3O60481 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZIC3O60481 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.44■□□□□ 0.22
ZIC3O60481 AC104581.1-202ENST00000635932 2618 ntBASIC16.44■□□□□ 0.22
ZIC3O60481 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZIC3O60481 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZIC3O60481 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZIC3O60481 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZIC3O60481 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZIC3O60481 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZIC3O60481 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZIC3O60481 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
ZIC3O60481 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZIC3O60481 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZIC3O60481 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
ZIC3O60481 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
ZIC3O60481 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZIC3O60481 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZIC3O60481 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZIC3O60481 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZIC3O60481 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZIC3O60481 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.43■□□□□ 0.22
ZIC3O60481 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.43■□□□□ 0.22
ZIC3O60481 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.43■□□□□ 0.22
ZIC3O60481 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZIC3O60481 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.43■□□□□ 0.22
ZIC3O60481 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZIC3O60481 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZIC3O60481 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZIC3O60481 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.43■□□□□ 0.22
ZIC3O60481 PHGDH-209ENST00000641074 1780 ntBASIC16.43■□□□□ 0.22
ZIC3O60481 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
ZIC3O60481 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
ZIC3O60481 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZIC3O60481 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZIC3O60481 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZIC3O60481 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZIC3O60481 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms