Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.15■□□□□ 0.5
PCDHGA12O60330 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGA12O60330 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGA12O60330 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.15■□□□□ 0.5
PCDHGA12O60330 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGA12O60330 AC074051.2-201ENST00000565115 352 ntBASIC18.15■□□□□ 0.5
PCDHGA12O60330 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.15■□□□□ 0.5
PCDHGA12O60330 GPR32P1-201ENST00000601788 811 ntBASIC18.15■□□□□ 0.5
PCDHGA12O60330 AL121912.1-201ENST00000603683 238 ntBASIC18.15■□□□□ 0.5
PCDHGA12O60330 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA12O60330 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
PCDHGA12O60330 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA12O60330 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA12O60330 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA12O60330 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
PCDHGA12O60330 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PCDHGA12O60330 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGA12O60330 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA12O60330 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDHGA12O60330 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGA12O60330 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA12O60330 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PCDHGA12O60330 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGA12O60330 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGA12O60330 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGA12O60330 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.5
PCDHGA12O60330 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.14■□□□□ 0.5
PCDHGA12O60330 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHGA12O60330 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PCDHGA12O60330 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA12O60330 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA12O60330 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.14■□□□□ 0.49
PCDHGA12O60330 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHGA12O60330 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHGA12O60330 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.14■□□□□ 0.49
PCDHGA12O60330 AL353801.3-201ENST00000609898 542 ntBASIC18.14■□□□□ 0.49
PCDHGA12O60330 GPALPP1-207ENST00000611650 899 ntBASIC18.14■□□□□ 0.49
PCDHGA12O60330 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PCDHGA12O60330 AC023511.2-201ENST00000618803 211 ntBASIC18.14■□□□□ 0.49
PCDHGA12O60330 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA12O60330 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHGA12O60330 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA12O60330 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA12O60330 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA12O60330 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PCDHGA12O60330 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA12O60330 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHGA12O60330 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA12O60330 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA12O60330 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGA12O60330 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA12O60330 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PCDHGA12O60330 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA12O60330 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA12O60330 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA12O60330 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PCDHGA12O60330 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA12O60330 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHGA12O60330 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA12O60330 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PCDHGA12O60330 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGA12O60330 LETM1P2-201ENST00000597330 2178 ntBASIC18.13■□□□□ 0.49
PCDHGA12O60330 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA12O60330 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA12O60330 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGA12O60330 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHGA12O60330 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA12O60330 AC138894.3-201ENST00000603787 634 ntBASIC18.13■□□□□ 0.49
PCDHGA12O60330 AC004263.2-201ENST00000617183 678 ntBASIC18.13■□□□□ 0.49
PCDHGA12O60330 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA12O60330 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PCDHGA12O60330 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
PCDHGA12O60330 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGA12O60330 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGA12O60330 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PCDHGA12O60330 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGA12O60330 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PCDHGA12O60330 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGA12O60330 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGA12O60330 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA12O60330 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA12O60330 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA12O60330 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGA12O60330 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA12O60330 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGA12O60330 AC034236.2-201ENST00000606662 1610 ntBASIC18.12■□□□□ 0.49
PCDHGA12O60330 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA12O60330 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHGA12O60330 AL138781.2-201ENST00000617896 1843 ntBASIC18.12■□□□□ 0.49
PCDHGA12O60330 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA12O60330 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA12O60330 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PCDHGA12O60330 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA12O60330 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHGA12O60330 IGHGP-201ENST00000390555 1178 ntBASIC18.12■□□□□ 0.49
PCDHGA12O60330 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGA12O60330 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGA12O60330 AC006538.3-201ENST00000612495 578 ntBASIC18.12■□□□□ 0.49
PCDHGA12O60330 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHGA12O60330 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms