Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSX4O60224 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.63■□□□□ 0.25
SSX4O60224 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSX4O60224 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSX4O60224 KRT16P6-202ENST00000425692 1426 ntBASIC16.63■□□□□ 0.25
SSX4O60224 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSX4O60224 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSX4O60224 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSX4O60224 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSX4O60224 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSX4O60224 CYP2D8P-201ENST00000433633 1490 ntBASIC16.63■□□□□ 0.25
SSX4O60224 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.63■□□□□ 0.25
SSX4O60224 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.63■□□□□ 0.25
SSX4O60224 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSX4O60224 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.63■□□□□ 0.25
SSX4O60224 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.63■□□□□ 0.25
SSX4O60224 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.63■□□□□ 0.25
SSX4O60224 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.63■□□□□ 0.25
SSX4O60224 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.63■□□□□ 0.25
SSX4O60224 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.63■□□□□ 0.25
SSX4O60224 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.63■□□□□ 0.25
SSX4O60224 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.63■□□□□ 0.25
SSX4O60224 KRT18P35-201ENST00000510488 1269 ntBASIC16.63■□□□□ 0.25
SSX4O60224 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.63■□□□□ 0.25
SSX4O60224 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.63■□□□□ 0.25
SSX4O60224 FITM1-202ENST00000559294 800 ntBASIC16.63■□□□□ 0.25
SSX4O60224 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.63■□□□□ 0.25
SSX4O60224 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSX4O60224 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSX4O60224 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSX4O60224 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSX4O60224 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.63■□□□□ 0.25
SSX4O60224 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSX4O60224 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SSX4O60224 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSX4O60224 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SSX4O60224 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSX4O60224 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
SSX4O60224 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSX4O60224 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSX4O60224 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSX4O60224 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSX4O60224 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSX4O60224 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SSX4O60224 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.62■□□□□ 0.25
SSX4O60224 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSX4O60224 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SSX4O60224 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
SSX4O60224 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
SSX4O60224 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSX4O60224 AC012317.2-201ENST00000623305 2251 ntBASIC16.62■□□□□ 0.25
SSX4O60224 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
SSX4O60224 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSX4O60224 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SSX4O60224 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.62■□□□□ 0.25
SSX4O60224 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSX4O60224 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSX4O60224 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
SSX4O60224 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.62■□□□□ 0.25
SSX4O60224 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSX4O60224 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSX4O60224 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SSX4O60224 AL137013.1-201ENST00000432946 1228 ntBASIC16.62■□□□□ 0.25
SSX4O60224 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.62■□□□□ 0.25
SSX4O60224 KRT18P57-201ENST00000443599 1254 ntBASIC16.62■□□□□ 0.25
SSX4O60224 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.62■□□□□ 0.25
SSX4O60224 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.62■□□□□ 0.25
SSX4O60224 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.62■□□□□ 0.25
SSX4O60224 AL590326.2-201ENST00000625139 305 ntBASIC16.62■□□□□ 0.25
SSX4O60224 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSX4O60224 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SSX4O60224 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.62■□□□□ 0.25
SSX4O60224 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SSX4O60224 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSX4O60224 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSX4O60224 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSX4O60224 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSX4O60224 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSX4O60224 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX4O60224 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX4O60224 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX4O60224 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.61■□□□□ 0.25
SSX4O60224 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SSX4O60224 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX4O60224 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX4O60224 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX4O60224 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX4O60224 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.61■□□□□ 0.25
SSX4O60224 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.61■□□□□ 0.25
SSX4O60224 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SSX4O60224 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
SSX4O60224 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.61■□□□□ 0.25
SSX4O60224 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.61■□□□□ 0.25
SSX4O60224 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SSX4O60224 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX4O60224 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX4O60224 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX4O60224 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.61■□□□□ 0.25
SSX4O60224 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SSX4O60224 ANO7L1-203ENST00000602586 1720 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms