Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDE6DO43924 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
PDE6DO43924 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDE6DO43924 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDE6DO43924 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.22□□□□□ -0.13
PDE6DO43924 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
PDE6DO43924 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDE6DO43924 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PDE6DO43924 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.21□□□□□ -0.13
PDE6DO43924 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.21□□□□□ -0.13
PDE6DO43924 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDE6DO43924 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDE6DO43924 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDE6DO43924 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDE6DO43924 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDE6DO43924 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDE6DO43924 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDE6DO43924 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.21□□□□□ -0.13
PDE6DO43924 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDE6DO43924 HYI-206ENST00000372434 1025 ntTSL 5 BASIC14.21□□□□□ -0.13
PDE6DO43924 GGT1-206ENST00000404223 952 ntTSL 2 BASIC14.21□□□□□ -0.13
PDE6DO43924 CYP2T1P-201ENST00000432607 1285 ntBASIC14.21□□□□□ -0.13
PDE6DO43924 RPS2P52-201ENST00000469610 820 ntBASIC14.21□□□□□ -0.13
PDE6DO43924 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDE6DO43924 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.21□□□□□ -0.13
PDE6DO43924 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDE6DO43924 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDE6DO43924 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDE6DO43924 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDE6DO43924 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
PDE6DO43924 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
PDE6DO43924 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDE6DO43924 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.21□□□□□ -0.13
PDE6DO43924 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
PDE6DO43924 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
PDE6DO43924 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.21□□□□□ -0.14
PDE6DO43924 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDE6DO43924 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDE6DO43924 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDE6DO43924 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.21□□□□□ -0.14
PDE6DO43924 AC046158.3-201ENST00000624947 2558 ntBASIC14.21□□□□□ -0.14
PDE6DO43924 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
PDE6DO43924 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDE6DO43924 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PDE6DO43924 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDE6DO43924 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PDE6DO43924 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PDE6DO43924 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDE6DO43924 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDE6DO43924 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.2□□□□□ -0.14
PDE6DO43924 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDE6DO43924 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDE6DO43924 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.2□□□□□ -0.14
PDE6DO43924 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDE6DO43924 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.2□□□□□ -0.14
PDE6DO43924 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDE6DO43924 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDE6DO43924 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDE6DO43924 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.2□□□□□ -0.14
PDE6DO43924 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDE6DO43924 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC14.2□□□□□ -0.14
PDE6DO43924 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
PDE6DO43924 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC14.2□□□□□ -0.14
PDE6DO43924 OR10C1-204ENST00000622521 1039 ntBASIC14.2□□□□□ -0.14
PDE6DO43924 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDE6DO43924 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDE6DO43924 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.2□□□□□ -0.14
PDE6DO43924 GMCL1P1-201ENST00000463439 1581 ntBASIC14.2□□□□□ -0.14
PDE6DO43924 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDE6DO43924 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PDE6DO43924 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.2□□□□□ -0.14
PDE6DO43924 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PDE6DO43924 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PDE6DO43924 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDE6DO43924 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDE6DO43924 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDE6DO43924 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6DO43924 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.19□□□□□ -0.14
PDE6DO43924 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6DO43924 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6DO43924 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6DO43924 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6DO43924 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6DO43924 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6DO43924 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6DO43924 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6DO43924 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.19□□□□□ -0.14
PDE6DO43924 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
PDE6DO43924 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6DO43924 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6DO43924 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6DO43924 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6DO43924 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PDE6DO43924 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6DO43924 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6DO43924 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6DO43924 LSM12P1-201ENST00000411836 588 ntBASIC14.19□□□□□ -0.14
PDE6DO43924 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.19□□□□□ -0.14
PDE6DO43924 CNN2P6-201ENST00000439038 900 ntBASIC14.19□□□□□ -0.14
PDE6DO43924 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms