Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RIPK2O43353 AC008622.2-201ENST00000617006 1229 ntBASIC18.63■□□□□ 0.57
RIPK2O43353 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.63■□□□□ 0.57
RIPK2O43353 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.63■□□□□ 0.57
RIPK2O43353 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RIPK2O43353 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
RIPK2O43353 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.63■□□□□ 0.57
RIPK2O43353 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RIPK2O43353 HTR7P1-202ENST00000624664 4411 ntBASIC18.63■□□□□ 0.57
RIPK2O43353 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RIPK2O43353 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RIPK2O43353 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RIPK2O43353 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RIPK2O43353 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RIPK2O43353 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RIPK2O43353 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RIPK2O43353 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.62■□□□□ 0.57
RIPK2O43353 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RIPK2O43353 AC022211.2-201ENST00000585075 2527 ntBASIC18.62■□□□□ 0.57
RIPK2O43353 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RIPK2O43353 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RIPK2O43353 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RIPK2O43353 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RIPK2O43353 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.62■□□□□ 0.57
RIPK2O43353 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RIPK2O43353 AC239809.2-201ENST00000415381 517 ntBASIC18.62■□□□□ 0.57
RIPK2O43353 KRT17P3-201ENST00000420566 1262 ntBASIC18.62■□□□□ 0.57
RIPK2O43353 AC008040.2-201ENST00000461049 708 ntBASIC18.62■□□□□ 0.57
RIPK2O43353 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.62■□□□□ 0.57
RIPK2O43353 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RIPK2O43353 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RIPK2O43353 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RIPK2O43353 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.62■□□□□ 0.57
RIPK2O43353 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RIPK2O43353 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RIPK2O43353 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RIPK2O43353 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RIPK2O43353 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RIPK2O43353 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RIPK2O43353 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RIPK2O43353 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RIPK2O43353 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.62■□□□□ 0.57
RIPK2O43353 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RIPK2O43353 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RIPK2O43353 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RIPK2O43353 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RIPK2O43353 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RIPK2O43353 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.61■□□□□ 0.57
RIPK2O43353 AL023806.1-201ENST00000603994 1649 ntBASIC18.61■□□□□ 0.57
RIPK2O43353 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RIPK2O43353 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RIPK2O43353 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RIPK2O43353 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RIPK2O43353 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
RIPK2O43353 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RIPK2O43353 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.61■□□□□ 0.57
RIPK2O43353 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.61■□□□□ 0.57
RIPK2O43353 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.61■□□□□ 0.57
RIPK2O43353 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.61■□□□□ 0.57
RIPK2O43353 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.61■□□□□ 0.57
RIPK2O43353 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RIPK2O43353 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RIPK2O43353 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RIPK2O43353 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RIPK2O43353 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RIPK2O43353 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.61■□□□□ 0.57
RIPK2O43353 SDHAP2-201ENST00000455183 2001 ntBASIC18.61■□□□□ 0.57
RIPK2O43353 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RIPK2O43353 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RIPK2O43353 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.6■□□□□ 0.57
RIPK2O43353 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RIPK2O43353 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RIPK2O43353 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.6■□□□□ 0.57
RIPK2O43353 AC034236.2-201ENST00000606662 1610 ntBASIC18.6■□□□□ 0.57
RIPK2O43353 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RIPK2O43353 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RIPK2O43353 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.6■□□□□ 0.57
RIPK2O43353 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RIPK2O43353 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RIPK2O43353 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RIPK2O43353 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RIPK2O43353 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
RIPK2O43353 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
RIPK2O43353 AP001094.4-201ENST00000579008 2176 ntBASIC18.6■□□□□ 0.57
RIPK2O43353 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RIPK2O43353 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RIPK2O43353 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RIPK2O43353 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RIPK2O43353 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
RIPK2O43353 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.6■□□□□ 0.57
RIPK2O43353 RPS2P4-201ENST00000476944 856 ntBASIC18.6■□□□□ 0.57
RIPK2O43353 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.6■□□□□ 0.57
RIPK2O43353 AP003097.1-201ENST00000530657 1135 ntBASIC18.6■□□□□ 0.57
RIPK2O43353 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RIPK2O43353 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RIPK2O43353 AC142086.2-201ENST00000569753 217 ntBASIC18.6■□□□□ 0.57
RIPK2O43353 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.6■□□□□ 0.57
RIPK2O43353 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RIPK2O43353 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.6■□□□□ 0.57
RIPK2O43353 AL109923.1-201ENST00000618799 583 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms