Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
MSI1O43347 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.99■□□□□ 0.63
MSI1O43347 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MSI1O43347 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MSI1O43347 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MSI1O43347 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MSI1O43347 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MSI1O43347 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MSI1O43347 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.99■□□□□ 0.63
MSI1O43347 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.99■□□□□ 0.63
MSI1O43347 TSPY22P-201ENST00000427496 604 ntBASIC18.99■□□□□ 0.63
MSI1O43347 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MSI1O43347 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.99■□□□□ 0.63
MSI1O43347 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
MSI1O43347 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MSI1O43347 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.99■□□□□ 0.63
MSI1O43347 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.99■□□□□ 0.63
MSI1O43347 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.99■□□□□ 0.63
MSI1O43347 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.99■□□□□ 0.63
MSI1O43347 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.99■□□□□ 0.63
MSI1O43347 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.99■□□□□ 0.63
MSI1O43347 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
MSI1O43347 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MSI1O43347 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.99■□□□□ 0.63
MSI1O43347 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.99■□□□□ 0.63
MSI1O43347 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MSI1O43347 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.99■□□□□ 0.63
MSI1O43347 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
MSI1O43347 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MSI1O43347 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
MSI1O43347 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
MSI1O43347 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
MSI1O43347 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.98■□□□□ 0.63
MSI1O43347 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.98■□□□□ 0.63
MSI1O43347 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MSI1O43347 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSI1O43347 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MSI1O43347 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSI1O43347 ESPNP-201ENST00000270691 2015 ntBASIC18.98■□□□□ 0.63
MSI1O43347 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSI1O43347 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MSI1O43347 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSI1O43347 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
MSI1O43347 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSI1O43347 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
MSI1O43347 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSI1O43347 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.98■□□□□ 0.63
MSI1O43347 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.98■□□□□ 0.63
MSI1O43347 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
MSI1O43347 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
MSI1O43347 IGHGP-201ENST00000390555 1178 ntBASIC18.98■□□□□ 0.63
MSI1O43347 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSI1O43347 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
MSI1O43347 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
MSI1O43347 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.98■□□□□ 0.63
MSI1O43347 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.98■□□□□ 0.63
MSI1O43347 AL390719.2-201ENST00000606993 987 ntBASIC18.98■□□□□ 0.63
MSI1O43347 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
MSI1O43347 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
MSI1O43347 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSI1O43347 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
MSI1O43347 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSI1O43347 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
MSI1O43347 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MSI1O43347 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MSI1O43347 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MSI1O43347 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MSI1O43347 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MSI1O43347 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
MSI1O43347 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
MSI1O43347 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
MSI1O43347 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MSI1O43347 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
MSI1O43347 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MSI1O43347 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MSI1O43347 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MSI1O43347 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MSI1O43347 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MSI1O43347 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MSI1O43347 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MSI1O43347 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MSI1O43347 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.97■□□□□ 0.63
MSI1O43347 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MSI1O43347 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.97■□□□□ 0.63
MSI1O43347 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
MSI1O43347 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.97■□□□□ 0.63
MSI1O43347 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.97■□□□□ 0.63
MSI1O43347 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.97■□□□□ 0.63
MSI1O43347 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MSI1O43347 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.97■□□□□ 0.63
MSI1O43347 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.97■□□□□ 0.63
MSI1O43347 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MSI1O43347 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MSI1O43347 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.97■□□□□ 0.63
MSI1O43347 GPR32P1-201ENST00000601788 811 ntBASIC18.97■□□□□ 0.63
MSI1O43347 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
MSI1O43347 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
MSI1O43347 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MSI1O43347 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MSI1O43347 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms