Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC85CA6NKD9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCDC85CA6NKD9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC85CA6NKD9 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC85CA6NKD9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC85CA6NKD9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 IGHV3-42-201ENST00000520410 361 ntBASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 AC051619.7-201ENST00000568314 623 ntBASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC85CA6NKD9 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC85CA6NKD9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC85CA6NKD9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC85CA6NKD9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
CCDC85CA6NKD9 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC85CA6NKD9 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC85CA6NKD9 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC85CA6NKD9 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.17■□□□□ 0.82
CCDC85CA6NKD9 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC85CA6NKD9 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC85CA6NKD9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC85CA6NKD9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC85CA6NKD9 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC85CA6NKD9 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC85CA6NKD9 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.17■□□□□ 0.82
CCDC85CA6NKD9 AL390754.1-201ENST00000619088 582 ntBASIC20.17■□□□□ 0.82
CCDC85CA6NKD9 REXO1L3P-201ENST00000622202 1288 ntBASIC20.17■□□□□ 0.82
CCDC85CA6NKD9 AC068587.10-201ENST00000641210 219 ntBASIC20.17■□□□□ 0.82
CCDC85CA6NKD9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CCDC85CA6NKD9 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC85CA6NKD9 TUBB3P1-201ENST00000405796 1332 ntBASIC20.17■□□□□ 0.82
CCDC85CA6NKD9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC85CA6NKD9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC85CA6NKD9 AL121761.2-201ENST00000598007 1648 ntBASIC20.16■□□□□ 0.82
CCDC85CA6NKD9 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC85CA6NKD9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC85CA6NKD9 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC85CA6NKD9 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC85CA6NKD9 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC85CA6NKD9 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CCDC85CA6NKD9 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC85CA6NKD9 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.16■□□□□ 0.82
CCDC85CA6NKD9 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.16■□□□□ 0.82
CCDC85CA6NKD9 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.16■□□□□ 0.82
CCDC85CA6NKD9 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CCDC85CA6NKD9 AC096734.2-201ENST00000562054 433 ntBASIC20.16■□□□□ 0.82
CCDC85CA6NKD9 AC009093.7-201ENST00000623853 1223 ntBASIC20.16■□□□□ 0.82
CCDC85CA6NKD9 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC85CA6NKD9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC85CA6NKD9 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC85CA6NKD9 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CCDC85CA6NKD9 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC85CA6NKD9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC85CA6NKD9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CCDC85CA6NKD9 AC006504.4-201ENST00000592118 1568 ntBASIC20.16■□□□□ 0.82
CCDC85CA6NKD9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC85CA6NKD9 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC85CA6NKD9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC85CA6NKD9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC85CA6NKD9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC85CA6NKD9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC85CA6NKD9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC85CA6NKD9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC85CA6NKD9 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC85CA6NKD9 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC85CA6NKD9 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC20.15■□□□□ 0.82
CCDC85CA6NKD9 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CCDC85CA6NKD9 AC113404.2-201ENST00000507884 177 ntBASIC20.15■□□□□ 0.82
CCDC85CA6NKD9 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC85CA6NKD9 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC20.15■□□□□ 0.82
CCDC85CA6NKD9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.15■□□□□ 0.82
CCDC85CA6NKD9 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC85CA6NKD9 SPDYE22P-201ENST00000582158 798 ntBASIC20.15■□□□□ 0.82
CCDC85CA6NKD9 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.15■□□□□ 0.82
CCDC85CA6NKD9 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.15■□□□□ 0.82
CCDC85CA6NKD9 LINC01126-201ENST00000623515 1646 ntBASIC20.15■□□□□ 0.82
CCDC85CA6NKD9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms