Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 MFAP1P1-201ENST00000442257 1255 ntBASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 MIR4651-201ENST00000582622 73 ntBASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 CD177P1-201ENST00000606252 935 ntBASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 DGCR10-201ENST00000609839 495 ntBASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 AL359736.2-201ENST00000621992 437 ntBASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
LINC00959A0A1B0GUT2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 KRT8P50-201ENST00000562022 1438 ntBASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00959A0A1B0GUT2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 FAM201B-201ENST00000458407 597 ntBASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 CA15P1-201ENST00000481698 905 ntBASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 AL096828.2-201ENST00000567259 1965 ntBASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00959A0A1B0GUT2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00959A0A1B0GUT2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms