Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 FER1L4-210ENST00000615531 5998 ntBASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF103-CHMP3A0A140T963 AC134043.2-201ENST00000624206 2238 ntBASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 LINC00896-202ENST00000609602 2128 ntBASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 GNAS-203ENST00000306120 1878 ntBASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 RARRES2P10-201ENST00000564312 460 ntBASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 AC011298.2-201ENST00000617989 482 ntBASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 FAM197Y4-202ENST00000622692 608 ntBASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 AL031985.4-201ENST00000642138 673 ntBASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF103-CHMP3A0A140T963 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 FAM201B-201ENST00000458407 597 ntBASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 AF186192.3-201ENST00000583427 947 ntBASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 AC068587.9-201ENST00000641814 219 ntBASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 MTMR9LP-203ENST00000426597 1545 ntBASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
RNF103-CHMP3A0A140T963 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF103-CHMP3A0A140T963 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF103-CHMP3A0A140T963 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF103-CHMP3A0A140T963 KRT8P3-201ENST00000519669 1449 ntBASIC17.66■□□□□ 0.42
RNF103-CHMP3A0A140T963 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
RNF103-CHMP3A0A140T963 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF103-CHMP3A0A140T963 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF103-CHMP3A0A140T963 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF103-CHMP3A0A140T963 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF103-CHMP3A0A140T963 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF103-CHMP3A0A140T963 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
RNF103-CHMP3A0A140T963 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF103-CHMP3A0A140T963 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.66■□□□□ 0.42
RNF103-CHMP3A0A140T963 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF103-CHMP3A0A140T963 AC073195.1-201ENST00000607241 877 ntBASIC17.66■□□□□ 0.42
RNF103-CHMP3A0A140T963 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF103-CHMP3A0A140T963 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF103-CHMP3A0A140T963 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF103-CHMP3A0A140T963 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms