Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RPS2P28-201ENST00000314255 741 ntBASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 FGFR3P6-201ENST00000457012 610 ntBASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 AC092865.5-201ENST00000545435 363 ntBASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 MTDHP3-201ENST00000594186 672 ntBASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 MIR7706-201ENST00000613747 67 ntBASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC187A0A096LP49 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 ZNF259P1-201ENST00000407656 1365 ntBASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 PMS2P7-201ENST00000506558 1336 ntBASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 AC068472.1-201ENST00000474589 881 ntBASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 TERC-201ENST00000602385 541 ntBASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC187A0A096LP49 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 AL158211.5-201ENST00000623583 2518 ntBASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 RPL13AP23-201ENST00000480739 586 ntBASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 POLD2P1-201ENST00000511220 997 ntBASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 FAM215A-202ENST00000632077 792 ntBASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms