Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
DDX49Q9Y6V7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX49Q9Y6V7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX49Q9Y6V7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 FEM1AP3-201ENST00000403722 1741 ntBASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 ANKRD18DP-204ENST00000455355 1975 ntBASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC22.03■■□□□ 1.12
DDX49Q9Y6V7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DDX49Q9Y6V7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
DDX49Q9Y6V7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DDX49Q9Y6V7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.02■■□□□ 1.12
DDX49Q9Y6V7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
DDX49Q9Y6V7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
DDX49Q9Y6V7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
DDX49Q9Y6V7 LIN28AP1-201ENST00000429574 405 ntBASIC22.02■■□□□ 1.12
DDX49Q9Y6V7 ATP5G1P1-201ENST00000448724 379 ntBASIC22.02■■□□□ 1.12
DDX49Q9Y6V7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC22.02■■□□□ 1.12
DDX49Q9Y6V7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DDX49Q9Y6V7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC22.02■■□□□ 1.12
DDX49Q9Y6V7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
DDX49Q9Y6V7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC22.02■■□□□ 1.11
DDX49Q9Y6V7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC22.02■■□□□ 1.11
DDX49Q9Y6V7 AC139713.2-201ENST00000641328 2723 ntBASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 AC096733.2-201ENST00000609937 1394 ntBASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX49Q9Y6V7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX49Q9Y6V7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC22■■□□□ 1.11
DDX49Q9Y6V7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
DDX49Q9Y6V7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC22■■□□□ 1.11
DDX49Q9Y6V7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
DDX49Q9Y6V7 AC126763.1-201ENST00000552015 2118 ntBASIC22■■□□□ 1.11
DDX49Q9Y6V7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX49Q9Y6V7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC22■■□□□ 1.11
DDX49Q9Y6V7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX49Q9Y6V7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX49Q9Y6V7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
DDX49Q9Y6V7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
DDX49Q9Y6V7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX49Q9Y6V7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
DDX49Q9Y6V7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX49Q9Y6V7 CD70-202ENST00000423145 881 ntTSL 2 BASIC22■■□□□ 1.11
DDX49Q9Y6V7 AC117947.1-201ENST00000427448 529 ntBASIC22■■□□□ 1.11
DDX49Q9Y6V7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC22■■□□□ 1.11
DDX49Q9Y6V7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC22■■□□□ 1.11
DDX49Q9Y6V7 AC083906.6-201ENST00000641366 219 ntBASIC22■■□□□ 1.11
DDX49Q9Y6V7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC22■■□□□ 1.11
DDX49Q9Y6V7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
DDX49Q9Y6V7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC22■■□□□ 1.11
DDX49Q9Y6V7 AC008764.6-201ENST00000595909 2069 ntBASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms